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Mutant Lines
16-1150-1

16-1150-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 2491739 [Map]; Strand: w
- AT3G07800.1 - [+] show detail - Thymidine kinase
  Distance: -652; Region: promoter
- AT3G07810.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -534; Region: promoter
- AT3G07810.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -554; Region: promoter

NNTGNAAAAG CNTTNTNCNT NAANNGNTNG ATCNCNANCN CGGGTCNGTC 
CANCNNGCAC GCCGNNGNGC AATGNNNATG NTNNNTCGTA TTNCTACAAC 
ACGAANTAGN NTGNTACATT TNTATCGTCN NGNTATNACN AGGANAATCA 
ATNNGNNCCA GAATTCCAAC ATATGATAAT ATGTACACCA GTAGGTTAAA 
ACTAAACCAA ACGTACACAA CAAGCCTAAA TTATCCAAAC AACAACAACT 
CTCAGTTTTG CTTTAAAAAT TCTGTGAATA AGACATCCTT AATTGCAAAT 
TTATTTTTAA TTACTTCTTT TTAAAAAACT TTTAGTGGCA CCATCCTAAT 
TAGTAATTAC TTTCTATATA ATTCTTCTTT AAGATACAAA CTAAAAATTC 
CGCAAAAAGA AACATCTAAA CATTCCAATA TATTAATATT TTTTTGTTAT 
GATAAATGGA AGGGAAAACG TATAAAAAGT TTAGTATTGA AAAAGAGAAA 
AAAAAGAANC AAACCANTTA TGTAATAATG AGTATAAATA TATAAATACN 
GACNTATCTT CTTCTTNTTG CACACCCAAA AAGCCTTNGT CTTTCTATNT 
CTNTACCAAA ACTTCTGTNT TTCTCTCTTT TNCTATAACN CTANAGCGCG 
TTACTGCGCG TNNTGAGTAT GTTTTATTGA CGCCNTTAAA TTGGGTTAAT 
TCGGTTTGAA TCGGATNGAA CAAAAACTGT ATTAATAANA ATTCTTCCTN 
TN

3 prime edge [+] show sequence

Chromosome: 3; Position: 2491670 [Map]; Strand: w
- AT3G07800.1 - [+] show detail - Thymidine kinase
  Distance: -583; Region: promoter
- AT3G07810.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -603; Region: promoter
- AT3G07810.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -623; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATACA 
TACGAAAAAT TAAATAAAAA TTGCAACTAC GAAAAAGCAA TGAACGTGTA 
TGTATTGGAA CACTTGAAGA AGGTTGTGAA CATGTTCATC TCAGGGCCAA 
AAAAAGCCTC AGGGTTTTGG GTTTAAGCCC ACATTCAAAA GCACACACAC 
AAAATGATGG GTTTGTAGGA TAAAAACCCA AGTGAGAAAG TTGTTTTCTC 
GAATATTACG AATTTACGAC TTTCTAATCT AAACAATAAT TCTAAAAAAC 
ATTAGTGGAA TATATGACCA AAAACCAGTA CCATTTTATG TGGATATATT 
TTTTAAAAAT ATTTATCATT CTCTTAAATA ATGTGTTTGC AAAGCCTAAA 
CACACATGTT TAAAAATTTC ATATGATCTA TACATTAAGG AAATTAATTA 
AAAAAAATAA GCCAATAGAA AATCAGTTTT TTTTTTTTTT TTNANTCCCC 
TTNNNNGGGC CCCCTTTTTN AAAAAAAANN GGGGAAAAAA AAAAANTNCN 
NTTNAAAAAA NNNTTNCCCC CNAAAAANNN ANTTTTTTNA AAAAANCCCC 
CNTTNAAAAN TTNAANCCCN TTTTTTTTNA AAANTTTTTN CNNAAATTTT 
TTTNNNTTNT NAANTTTTGG GGGGNCCGNN TTTNTTTTTT TTAAAANNTT 
TTTNCCNTTN TTTNCTAAAA ACCNAAAAAA ATTNNACCCC TNCCCCTTTT 
TTTTTTNAAA AACNNTTTTT TTTTTAAANT TTTNNCNGGG GGANNNTNAA 
AANCNCCCCC CGGG

AT3G07800.1

Model type: Protein coding
Short Description: Thymidine kinase
Computational Description: Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07810.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54138 Blast hits to 30457 proteins in 1475 species: Archae - 38; Bacteria - 13880; Metazoa - 18730; Fungi - 4978; Plants - 7803; Viruses - 149; Other Eukaryotes - 8560 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07810.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink).
Link: InterPro Scan - TAIR