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16-1375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 183232 [Map]; Strand: c
      • AT1G01490.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -939; Region: promoter
      • AT1G01490.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -874; Region: promoter
    Flanking Genome Sequence: 16-1375-1 - 5-prime edge 
    CTNTNAAAAC TAACAAAATC GGTTCTNCGA TAACGGNCGT TACGNGATCC 
    NGCCGTAANA AGTTTCNTCC CTGTTTANNC TACGAGCTNN NTGTNACGGG 
    NCTCATACTG NGCTTCNGAA TGCNNNCAAN ANNAGNNCCG GANTAANGGC 
    NCNANNCNTA GANGGTATTG GATNACCAAG CCCGGGCCCG GGGACCACTG 
    CAGTGCCCNA TANCCTTAAT GATNGTATAC ATTATTNATT GNCTACNNTA 
    TGTATTTACC NACAAAAAAC AACCAACATT TATATTATNA CTAAAGATAT 
    TTATTTCGTA TTAATCGANG GATTGGTGAT CAAAAGCAAA AATCATTTAC 
    NAAACTATGN ANAATNNGAG TTTGATAGCT GATAAANTGT TTAATANATN 
    GTTTCTACAG CANGTNTTTG TNCGGCTGAA NCCCCNCATN NTATTATCNT 
    GTGCCAAGTN AAATNANTGA TNTATNTATA CATNTATATT TNGAGNNANT 
    NNACANATAT AGNNTNTNNA CCNCCCGNGC CNNANNANNG GGGGAAGNGA 
    GGNGAGTGNN CAATANNAAA AGNGNNGGGG NNNGGGGTNG NANAAAANAC 
    ACACCGTNNA NANANNGGCG GNGNGTTNTA NANTNTANGN GNGGGAGAAN 
    AGGNGGNNNG CGNGNANATN GCCNGNANGT GGNCNNTTNN ATNNNGNNNG 
    NGTTNNAGNN ANTCNTNNCN CNNTNNTTNN NTNNNTNTAT ATGACAANGN 
    GNNTNNNNTN NANNNNNCNT NGAGNGGGNA NANNTGNAGN ATNTGTANGT 
    CTNTTATNNT TANANAAAAA AAAAANAAAA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 183226 [Map]; Strand: c
      • AT1G01490.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -933; Region: promoter
      • AT1G01490.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: -868; Region: promoter
    Flanking Genome Sequence: 16-1375-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACCATCGGTT TGCCAATCCT ACACGAATTT GATTCTCTAA ATAAAGACAA 
    ATAATATTCT CCAAGCCACA CACAAAAAAA AAANCNTNCT TTANTAGGGG 
    GAAACAGCNG CTTNTTCCNC GGNGTTNGCC CNCGTAAATA AATNNTTATT 
    TCTTTTNAAT NTTGGNCGNC CNCAAANTNT NTNTNCAAGG GGNTNGGGTT 
    TTNGGCTACC NCGNGAAANC CCCCNNCAAN CNGNNANTAN NGGAANCNAA 
    ACGNGANNAA ATTNGGGTAA NTNNGGGCCN NTTAAAGGGG GANGGGGGAC 
    CTNTTNCTNN GANGTNNAAA TTNTNNGTTT TTNGTTNTTA NAAAAAAGGG 
    GGGTTTANTA GNNANTTTTT NCCNTTACNT NNATNGACCC NTCCTNNTTT 
    TTNGATNNGG NCCGNCANTT TTAANCNTTN AAAGGACTNG CTTNGCNNGT 
    AGNANTTGGG NNANNANTCA AANANTAANC CCATTTNGNC CTANGTCCNC 
    NTTTNTTNTT TTNGGGNAAN CTTNGCCGGA ANAAANNGGA AANAANNNGG 
    NATTTTNCNN NCCGGGGNGG GNANCCCCCG NNGNCNTT

AT1G01490.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 7083 Blast hits to 3987 proteins in 399 species: Archae - 47; Bacteria - 875; Metazoa - 1731; Fungi - 337; Plants - 1157; Viruses - 96; Other Eukaryotes - 2840 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01490.2

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G63950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR