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16-1418-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12839450 [Map]; Strand: c
      • AT2G30080.1 - [+] show detail - ZIP metal ion transporter family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1418-1 - 5-prime edge 
    GTAACAATGG GAATGTCACA AAATAAGTGT ACCATTAGAC CTTTGATTGC 
    TGCACTTTCT TTTCATCAGA TTTTTGAAGG TTTGGGTCTT GGTGGTTGCA 
    TTGCCTCAGG TTTGTTTCTT TCTTCATTTC TTTTTATTTT CGGTAAACTA 
    GTTCTCACAA ATTTAATTAG TGTTGAATTA GTTAGGAGAG AATAATAAAT 
    ACTATGAGAA AAAACTAGTT GGTTCTGACT TTAGACATAA TAATATTTTA 
    AGAAACCTAG AAGAAGTAAT AGTAATATGT AGATGTTGAC ATTTTTGCAT 
    ATCATAGAAT GTGACATTCT AATTTAGAGC AGCTCATGGA CCATATCAAA 
    ACCATACCAA TAATCCAAAA AACCGAACCA ATATAACATT TTGTGAGTTT 
    CATTGATAGT TTTTTGGTCC TTAGGATAAA ACTTAGGATT GATGAGTGGT 
    ATTGTTTGAT GGTCAGGCTG GGTTTAAGGC AGGGACAGTG GTGTATATGT 
    GCTTAATGTT CGCGGTAACA ACGCCACTCG GGATTGTACT AGGGATGGTG 
    ATATTTGCAG CGACCGGGTA CGATGATCAG AACCCGAACG CATTGATAAT 
    GGAGGGTTTA TTGGGATCAT TCTCTTCAGG TATTCTAATA TACATGGCCT 
    TGGTTGACCT AATTGCATTG GATTTCTTCC ATAACAAGAT GCTGACNACT 
    TGCGGTGAAT CGGGTTCTCN CCTNAGAAGC TACCAGCCCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12839566 [Map]; Strand: c
      • AT2G30080.1 - [+] show detail - ZIP metal ion transporter family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1418-1 - 3-prime edge 
    ATNGCTACTC NAANTATCAN NGAATGAAAT ATAATCCCTA TTTCAAGAAC 
    TTGTGACACT AATCTTTGTT TCATCTTCAC AATTTCCTCC TCACTATTTT 
    CTTGTATTTC CAAATCATCC CCACACTTTC CTTCTTTCAT TTCTAACCCT 
    CCAACCGCCT TACCCACCGG CATATACTCC ATCCCTCCGT CACCACCACC 
    ACCACCACCG TGTCCCATAT GTTCACTCGC CGCTAAATCA ACCAACNAAG 
    CCGNTNTTGC CTCCNATCAT TNTTAACTAA ACCANNCAAA NNNAAAAAAT 
    CNTTTCAATG GANGAACTNT AACAACNCTT GGCCATNNAC CCAAATNACT 
    TAANGCNGCT TTAAGGTNAA ACCNTGGNAC CTAAAAACGN TGGNGAAAAA 
    CNNCCCCCNC CAGCCAAACC NNTTTTTAAN AAAAANANNT TTTTTTNTTT 
    TTCCTCANGT TTTACNNTTA AANTTTTTNN NNAATANAAA AATGGGCCCC 
    CNNNATTTNA AAANCGCTTN NNNGAAAANC NCGGAANANG GNGNANATTG 
    ANAAAAAAAA NCTTAACANC GCANAANAGC GGNGGGGGGG GGGGGGGAAA 
    ANNGNNCTNT NCTCCCATNN NTTTCTTTTT TNAAANAAAN GCANAAATNN 
    CAANNATAAA NATTCNANNG CAAACNACTN NNCCNCNNNT CNATAATANA 
    AATCNTTNNN NAAAACNNTC TCCTTTNNNN ATTATATAAA AACAAGAANN 
    NTAGNGANGG GGGGGTAAAA ANANANCNGT TTTTCTCTNT CTNTTTCCTA 
    TCTTTTATTA ANGGNGNNNG NGNGGGGGGG GGNNTT

AT2G30080.1

Model type
Protein coding
Short Description
ZIP metal ion transporter family
Curator Summary
member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.
Computational Description
ZIP6; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 7 precursor (TAIR:AT2G04032.1); Has 1739 Blast hits to 1619 proteins in 263 species: Archae - 0; Bacteria - 69; Metazoa - 337; Fungi - 628; Plants - 518; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink).
Link
InterPro Scan - TAIR