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16-1580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5189335 [Map]; Strand: w
      • AT1G15080.1 - [+] show detail - lipid phosphate phosphatase 2
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 16-1580-1 - 3-prime edge
    TCTGGAAGTA GGCATGAGGT CCCCAACCTG AAAGCAAACA ATCCATATAG 
    AGATCAGTGT TCCTTAATAT CTATGAAACA AAGTGACTTT ATCTTGAAGA
    CAAGAGGTTC CTCAGTCACA CACCGTCTGG ATCGTATGGA GGAGGGAAAA
    ATTGCAGATA ACAAAATGTG GCCACAGTCA ATCCTGGACA TTGCAAGAAA
    GATGTGTGTC TGTCATCAGC TTTGTTTCTC AAGTAATTTT GAATT

AT1G15080.1

Model type
Protein coding
Short Description
lipid phosphate phosphatase 2
Curator Summary
Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.
Computational Description
lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink).
Link
InterPro Scan - TAIR