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16-1697-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 390446 [Map]; Strand: c
      • AT4G00910.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-1697-1 - 5-prime edge 
    GTNANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TCTAGGAACA TCTATTTGCA TTATCATTAC TGTCTTCTTC 
    TGTCCGATTT GGGCAGGATC TCAGCTTCAC CGTCTTATTG AACGTAACCT 
    CGAAAAACTT GCTGATTCGT TAGACGGTAA GGGAATAAGG AAACCAAAAT 
    TGTTATGACA GATTCAGCAT TATAGCTAGA GTGCTGACTG TTACTAAAAC 
    TGCAGGCTGT GTAGCAGAGT ACTTTAAGGA GAACGAAGTC TCAACGAATC 
    GAAATGAAGA TGAAAACACT AACATGAAAT TGCAAGGATT CAAATGTGTA 
    CTCAACTCTA AGGGAACAGA GGAAGCCATG GTAACTTAAA TAGATTATCT 
    ATGGGGATAA AGAAAAGTTC ATTTATCTTT TTGATTTGCA GCCGCTTATT 
    CGGTTTTCGG GTTTTTCTTT CTCTCAGGCG AATCTAGCGA GATGGGAACC 
    TGCACATGGA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 390450 [Map]; Strand: c
      • AT4G00910.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-1697-1 - 3-prime edge 
    ATTGNAAACG GTAGAGGTAT TTTACCTGAC CGTTACCGAC CGTTTTCATC 
    CCTGCCTATT GCAATAGTTG ATACTCTTTG CTGAGCCAAT TCAACAAGCT

AT4G00910.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 1015 Blast hits to 1014 proteins in 357 species: Archae - 0; Bacteria - 624; Metazoa - 0; Fungi - 16; Plants - 351; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR