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16-2174-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10125823 [Map]; Strand: c
      • AT1G29025.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 16-2174-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGTGAATCA TTACCAAATA AACAAAGTAG AGAACAGTTG CAGAACCAGA 
    GAATATGAGT GTGACCAAAA CCATATTGTC ATCCCAAGAT TTTATGTGAA 
    ATGTCTCTGA AAATGTGACT AAGACGAAAG GCAATAAAGT CAGGAGCATA 
    ATCCCTGCCG CTTTCTTGTT CTTAGGATCT GCTCTAATGC TAGCTCCTGC 
    ATAGAGAAAC GGCACAAAAG ACAAATTAGT CTCGCGTAGA AGATTCTCGA 
    AAAATCAAGA AACCTGTAAG ATTTAAAAAT ACCAGCTAGG TTCTTCAATA 
    GATTAATGCT CTTCTTAACT TGTCTTCTTG GACTACTTAT GTCCTGTATC 
    AAATTATAAA AATCACTTGA TGATTCTATA CACTCAAAAA GAGAAGAAGG 
    ACAAGAAGAT C

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10125819 [Map]; Strand: c
      • AT1G29025.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 16-2174-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC CTTCAAAAAA ATGATGTAAA GCTTCAAGAT 
    TCATATCTTT TTGTGCCTAA TCTTTTTTTT TTCAAAACCC GCAGTNTTTN 
    GATAAAGCGG NCCAAGNGAA NAGCCTAAAA TNCCCNAAGT TNGANCTCAT 
    GTCAAAAGTT CATAANCNCT NGCAAAATTT TTCGCCTCAA AGCCTTATAA 
    NAAANGGACA ACTNTGTCAA NANAGCTNGA AANGGTTNGT TTCTACATTT 
    TTTCCTTNGT TATTCTAATT TNAAAAAACN CTCTTTTNAT TNGATTCNGT 
    TNCNGTATTC TNACNGGTTA TTTTTATTCA GTTGGTTCAA AAAGTTNGAN 
    GTCAACAAAN ACGGAAANAT CCAAGTTTCA AAGTTAAAAN ATN

AT1G29025.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1).
Link
InterPro Scan - TAIR