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16-2185-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5186780 [Map]; Strand: c
      • AT1G15060.1 - [+] show detail - Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
        Distance: 0; Region: exon1 (CDS)
      • AT1G15080.1 - [+] show detail - lipid phosphate phosphatase 2
        Distance: -846; Region: promoter
    Flanking Genome Sequence: 16-2185-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCNA NNATTGAAGA GACTTTTATT GTGGTTAAAC 
    ACTCTGGTTC GGTTCAGGAC TTTCAGAATT ACCANCCCGG GCCGTNGACC 
    ACNCNNGCCC TATAGNGGGA ANCCTTCTCT TATGCACGCG CCGNACGAGC 
    TTCATTACGT CTCCGTTCCA AACACCGATT GGCGTCTCGC TCTTTGGCGC 
    TACTTGCCTC CTCCTCAGGT TTTCGAATTT CAACAATCAC CTTTCTCTGT 
    ATCTGCAATT TTGATTATTT ATTTTCTTAC GATCAAGAAT TTTCTCTCTT 
    CTCTTAGGCT CCGACGAGGA ATCATCCATT GTTACTGTTG TCTGGAGTAG 
    GAACTAATGC CATCGGATAT GATTTATCTC CTGGTGTATG TTACCTTCAT 
    CGTTTTTAAT GTCAATCTTT ATCATCAAGA TCTACATTGT ACTAGTGTAT 
    CTTTAGATGA GGAAGTAGAT TTATTGTTGA TCAATGTCAA GTAAATCTTC 
    GTTGATGTCA TTGCAGTGCT CTTTTGCAAG GCATATGTCT GGACAGGGAT 
    TTGAGACTTG GATTCTCGAG GTTCGTGGAG CTGGATTGAG TACACGAGTA 
    TCTGATCTTA AGGACGTTGA GGAATCTGCT CATGAATTGT CGAATCANAT 
    AGAATCTACT GCTAGAGCTG CTGCAGGTAA AGAAACTTGT TCTGATGAAA 
    AGCAGACTAC TGATATTATG GACAGTAGTG CACCTGCACC AGCGNNGGAT 
    GTTTNANTTG TTGGCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5186822 [Map]; Strand: c
      • AT1G15060.1 - [+] show detail - Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
        Distance: 0; Region: exon1 (CDS)
      • AT1G15080.1 - [+] show detail - lipid phosphate phosphatase 2
        Distance: -804; Region: promoter
    Flanking Genome Sequence: 16-2185-1 - 3-prime edge 
    GATGGAACGG TGGAGATAGA CGGTGGAGGA AGCCCGGCGA AGAGCTGAGC 
    GGATC

AT1G15060.1

Model type
Protein coding
Short Description
Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
Computational Description
Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15080.1

Model type
Protein coding
Short Description
lipid phosphate phosphatase 2
Curator Summary
Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals.
Computational Description
lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink).
Link
InterPro Scan - TAIR