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51-2461-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 722090 [Map]; Strand: w
      • AT5G03070.1 - [+] show detail - importin alpha isoform 9
        Distance: -551; Region: promoter
      • AT5G03080.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-2461-1 - 5-prime edge 
    NGGTNNGGNN NCTACCCCGA TATCATCTCG GACATTTCCT CGCCTGGATC 
    TCTCTCGTCC CAGTCTTCAT TAGCCTCGGT GGATTCGTCT CTCATTTCCT 
    TTTCCGGCGT GAGCTTCAAG GGATCTTCTT CGGTATAGGT CTCGTGATCT 
    CACAATTCAT CAACGAGTTT ATCAAAACAT CTGTAGAGCA AGCGCGTCCC 
    GAGACATGTA CGTTGCTCGA AGCTTGCGAT TCACATGGAT GGCCATCAAG 
    CCACTCGCAA TTCATGTTCT TCTTCGCTA

AT5G03070.1

Model type
Protein coding
Short Description
importin alpha isoform 9
Curator Summary
Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description
importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G03080.1

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 881 Blast hits to 875 proteins in 378 species: Archae - 15; Bacteria - 412; Metazoa - 127; Fungi - 150; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR