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51-2771-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7280769 [Map]; Strand: c
      • AT5G22010.1 - [+] show detail - replication factor C1
        Distance: 0; Region: exon23 (CDS)
    Flanking Genome Sequence: 51-2771-1 - 3-prime edge 
    TTACCAGCCG CCTTTCTTGA ACCTGAGCTT CCAGCTCCTT TCAAATCCAA 
    TTCCACTTGG ATCCCTGCAA CCCGATTATA TTCCGTTAAG ACTTGCAGAT 
    CCCCGCCCAG AGAGGGATAA GGAGTAAAGT TTTTGGAAAG TCGTCGTCAT 
    TCAGAGCCAG TATATATGAA TTTAGGTTCT AGACTGAATG GCTTTCTTAA 
    GGTAAAGACA ACTATCTAAA GCAGTAACAA GACGAACCTC TAGCATTCAG 
    ATTTTTAAGA TTGGACTCCA GCTTTTCTCC ATCGGTTGCT TCTTCTGGAA 
    GATCGAAACA AAACAGAGAA GAAACCAAGT CAGGATTTCG TCTGGTCTAC 
    TTCCAAGTCA TATTAGATAT CGAAGGTNAT TTTGTAATGT CTTTCTGAGG 
    CTCAGTCTTT GATTATACAG A

AT5G22010.1

Model type
Protein coding
Short Description
replication factor C1
Computational Description
replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR