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52-0070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1783376 [Map]; Strand: w
      • AT5G05930.1 - [+] show detail - guanylyl cyclase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT5G05930.2 - [+] show detail - guanylyl cyclase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-0070-1 - 5-prime edge 
    TTCATTTGTT TTTTTGCTCT TGGGATAGCG ACGAATCCTG AGATTATTCT 
    AATTTCAATC TTTTCTTCTT CTTCTTCTTA TTCTTGTCTT CTTCTTATTC 
    ATCCTTCAAT AGTTTTCTTA CCAAATAAAT AGCAGCAACA ATAAAACCCC 
    TTTCAAATAA GTTGGAACGT GATTTTTTCA CGTTCTCAAT TACTTGAAAA 
    CGTGATTTAT ATCAATATTT CACCGTTCAG ATTTCAGAAG ATAAAATCGT 
    TTACCACTTT AACGTTTTCA CGTTTCCAAA CATGATTCTG ATTTTGATTT 
    TGTGCAAAAT GTATTTTATT AGTCTAAACT ATAAAACAGT TTATGAATAT 
    TCTAGAAAAA AAACCCTCTA TTCAGCTATA ATATTTGTTT GATTCAATAA 
    TTTTATGAGA TTTTAACTAT CAATCTCACA TATACCAATT TGTCTTCTTA 
    TGAACTTTAT GGTTGTATTT ATTATGATTA GTGAGTATAT ATTTTCTAGG 
    GTTGAGGTTG GCAATTGGCA TATGGCTAAA CAACCCTATT GCTTAAGGCT 
    TAGTTTATGT AGGTTAAACT TGTACTTAGA TCTAAGATAT CTATATGCGG 
    GCAGCACAAC ATGCTTTCAA CCATGTTTAG ATAGTTTCAA TTGCAAACTT 
    AAGCAATGAT TCATTACTAC TGAGTATATG AGAATTGAAG CAAGGNTTAG 
    TCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1783260 [Map]; Strand: w
      • AT5G05930.1 - [+] show detail - guanylyl cyclase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT5G05930.2 - [+] show detail - guanylyl cyclase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-0070-1 - 3-prime edge 
    CAAATGAAAA CACGAGAAAC GTGAAGATAC AGCTCCCGTC TCCTTTATCC 
    AAATTCCAAA CCTTTTTCAT TTTCCCAGGA AAATTGAGTA ATAATTAGAA 
    AACTCATCGT CCTCATTGAG CTGCAGATCC CATAATCTCT CTCGCCAATC 
    ATCTCCCTTG CATCTTAATC AAAGGTATGT CCTTCTTCTC TCCCCTTCCA 
    NTCGATTGGT ACATCAATCG TAAGGAACTT GATCACAGAT TTCTCGATTT 
    TAGATGTTGG GGTTTTGATT GGGTTGAGTC ACATCTGAAT TTCAGCGTCA 
    TTGGTTGGCA ACTGCGAGAC TTTCTGGTGC CACTGAGATT TTAACAAAAT 
    TGGGGTTTTC GATTCAAAAA GTCTTTTCTT TTTGGGTACT TTTCGTTGAA 
    CCTTTTA

AT5G05930.1

Model type
Protein coding
Short Description
guanylyl cyclase 1
Computational Description
guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G05930.2

Model type
Protein coding
Short Description
guanylyl cyclase 1
Computational Description
guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR