1. Home
  2. Mutant Lines
  3. 52-0260-1

52-0260-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6800627 [Map]; Strand: w
      • AT4G11150.1 - [+] show detail - vacuolar ATP synthase subunit E1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 52-0260-1 - 5-prime edge 
    TAATTTTCTT CATTGATGAA TAAGAAACAT AGTCTGGTTT AGTCTAATCG 
    GCAAAACTGA AGACTAATTT AGCAATTAGT CTGATGTAAG ATTATGGTGT 
    AGTAGTGTAC TGTGTTGATC TAGCNTTTCA AATTCTCTAA TATTGTTAGT 
    TCTCTGTGAA AATTATGTTG ATCTTGTTCA TTTACTGTGT TATCGTGTAT 
    TACTTTGCCA GAAAATAACT CTCATACATG TTTTTTCAGT GATTACTCTA 
    TGCAGCTAAA TGCATCAAGG ATCAAAGTTC TTCAAGCGCA GGACGATATT 
    GTCAATGCCA TGAAAGACCA AGCAGCTAAG GATCTTCTGA ACGTTAGTCG 
    CGATGAGTAT GCCTACAAAC AGCTCCTCAA GGATCTAATT GTTCAGGTTG 
    GTGCTTAAAA AAAATCCTTG ATGCATTCAA ATAAATATTT GATATTGGAA 
    CTGTTTTTTT GTATATCCTA CTGGAGATTA TGTAATCGCT TTCTTGTGTC 
    GGATGGCAAA TCTTTTTTTT GTGTGTGTTT TGATCCGTTC TACTGATGTC 
    ATTTTGCATT TAGAATACCT TTTGGTCTGT TAAAGATTAT CTATTGTATT 
    GTTGCAGNGT TTGCTTCGGT TGAAAGAACC TTCTGTGTTG TTGCGTTGTC 
    GTGAANANGA CTTGGGTTTA GTCGAAGCTG TACTTGATGA CNCAAAGGAG 
    GAAATGCTGG TAAGCAAAGG TTCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6800511 [Map]; Strand: w
      • AT4G11150.1 - [+] show detail - vacuolar ATP synthase subunit E1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 52-0260-1 - 3-prime edge 
    GAAAATTACA TGTTTGAAAT CAATCAAGTC AAAACTTCAA ATCTATAAAT 
    CATACACTTC TAGTTTTTTC AAAGTTCAGA GATATTGTAA TCCAGAACAA 
    GCGATCTAAC TTAAAACTAA ACCAAGATCA AAAAAATTGA AATCAGAAAA 
    CTCACATCTT CTTGCGAACA TCAGCTTGCT TCTCCTTCTT CTCATAATCT 
    TGCCTGATCT TCTTCTTCTC CGCCTCAACA AGCTGGAGTT TCTCAATGTT 
    GAATT

AT4G11150.1

Model type
Protein coding
Short Description
vacuolar ATP synthase subunit E1
Curator Summary
Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.
Computational Description
vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR