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Mutant Lines
52-0267-1

52-0267-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 17758609 [Map]; Strand: c
- AT3G48090.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -829; Region: promoter
- AT3G48090.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -852; Region: promoter
- AT3G48100.1 - [+] show detail - response regulator 5
  Distance: 0; Region: exon5 (3UTR)

GGTTGGAACA CTTTACATGG CTTTTCGTAG AAATTTCCCC AAGTTGGGTT 
TTATTAAGAC CAAGAAAATT CTAGTCTCCT AGACTTTTTT TTGTTTCTTT 
TGTTAATTTA GTCTCCTAGG CTTTTTCATT CTATCTGAAA GCAAAATATG 
GTTATGCAAT TTGGTTATAG CCAAAAAAAC AAACTAGATT TTTCTAGTCC 
GGTTCATGTA ACTTCATAAT CAAACAAGTA AAAGTCGAAT GTGACGCGTC 
TTGCCGAACG CAAAAACGGA CCAGGCAAGA AGGTGTAGTT AGTTAATTCG 
GTTAATATTC AGCTGAGAGA AATCGAACCG GTTCCATATC TTGTAGATTA 
TCCGGTTTAC TTTCCGGATA AGATTTATAA GCAAAACAGA GTTGAAGTAG 
ATTTCTTCTA TAGTAGACCA AATCTGAAAC CCCAAGTCAA GCTACAAAAA 
CTTAACTCGA AGCGAACAAA TTTCCTCATT CATAAAACAA CAAATTGTTT 
TCCGACAAAA AGTGAATATC ACTGAGTTAC TGCGAAATCC CAACCGAGAG 
TGACATCTCA AACCAAAAGA TGGATGACGA AGACTCCAAA GTCAAGCTAC 
AAAATTTCCA AGCAAAGATT ACACAGAGAA AACTTTCCGA CCAAATGTGA 
ATGTTTATGA AAGTTTCTGC GAAACTCCAG TCATGTCGGA TGTACAAAGC 
CATAAACCAA TGTAAACCGA CACG

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 17758723 [Map]; Strand: c
  - AT3G48090.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -943; Region: promoter
  - AT3G48090.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -966; Region: promoter
  - AT3G48100.1 - [+] show detail - response regulator 5
    Distance: 0; Region: exon5 (3UTR)
Flanking Genome Sequence: 52-0267-1 - 3-prime edge
```
GAATCCAACC AACGCTTAAA ATAACTAACT TATCTCGCTG GATNCGATTC 
ATGTAGACAG CTTTATTTTA ATTAGACAAA AGATTAGCTT GTCTTCGTGT 
AATGAACGGT ACTAAACTAC TAATCCATTC CTAAATCATT ATTTAAGTAA 
TCTTAACAAA AGAAATTNTT NTGTTAACTT CCAAAATAAC ACACCACCAT 
TTTACATATC TCTCATGTAA AGAAAAAAAA AATGTNTCTC TTCNCCTCTC 
TAATGAATCC AAGTCTACAA TTTACATTTC TATCTTATAA AAACCCATCT 
NTGTTTCTCC TC
```

AT3G48090.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Curator Summary: Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.
Computational Description: enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 536 Blast hits to 485 proteins in 45 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 491; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G48090.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Curator Summary: Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.
Computational Description: enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G48100.1

Model type: Protein coding
Short Description: response regulator 5
Curator Summary: Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.
Computational Description: response regulator 5 (RR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 6 (TAIR:AT5G62920.1); Has 45766 Blast hits to 45301 proteins in 2636 species: Archae - 240; Bacteria - 40380; Metazoa - 18; Fungi - 471; Plants - 1420; Viruses - 2; Other Eukaryotes - 3235 (source: NCBI BLink).
Link: InterPro Scan - TAIR