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Mutant Lines
52-0386-1

52-0386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 7750635 [Map]; Strand: c
- AT5G23090.3 - [+] show detail - nuclear factor Y, subunit B13
  Distance: 247; Region: intergenic
- AT5G23100.1 - [+] show detail - Protein of unknown function, DUF617
  Distance: -2799; Region: intergenic

CCTGCTAGTA CCTTCCCCTT CTTCGACTCT CCCTCACTCC TCTTACCTTT 
TTTTTTGGGG TCAAAAGTCA TCCTACCTTT TACAGTATAT ACTTTAATTA 
ATGATGTCAT AATTCATCAG TTTATGTACA TTTTTAGTAA GAAACTAAAA 
TATTAATGAA CCATTTGTCT TTGCTTTGTA AGGACCTATT TATTTAATGA 
ACAAATCAGT TATTAGTACG AACAGATTAA AATTTGAGAC TGGGAAAACT 
AGAGTCTATT AAATAATTTC ATCAATTTTA TGTTTTTTCT ATTAATGACA 
AAGACAAAAC ATACAAACCA AGGGCATATA AGGGATGCTT ACTAATTACA 
TCTGAATCAC AAGTGTTTTT AGATCGTGAA ACACTAACTA ACATATATCA 
TACTAAGGGC ATATAAACAG AGAACATATG CAATTGCAAC TTACAAGGGA 
ATGTTAAAAG GATGTTGTTT TTCTTGCCTA ACACTTACCC TTACGGTTTC 
AGTTAGCTTT GCGGACTTCT CTGGTCAGTT TCTGGATGTT CAGGTTGAGG 
AACCGAAACA CCTCCATTCA TTCTTGCACG TGCTTCTGCA AACATACGTT 
GTTGCTCAGC TGCTGCTTCC TCCTCAGTCA TTTGAGCTCC AGGGTTCCAT 
TTCACGCTCC TCTGTGTGTC CTGCTATAGA GTCACAAATG TAGGAAACNG 
TTAACATTAA TCAT

3 prime edge [+] show sequence

Chromosome: 5; Position: 7751239 [Map]; Strand: c
- AT5G23090.3 - [+] show detail - nuclear factor Y, subunit B13
  Distance: 851; Region: intergenic
- AT5G23100.1 - [+] show detail - Protein of unknown function, DUF617
  Distance: -2195; Region: intergenic

ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCG 
AGTGACGTGT CAGTTCGCAG GTTTCTGTTT ACTCTGCACC CGACAACTAA 
TAAGAGAATC AGAACAGACC TATTTCATAT CTTACTATTT ATGACGTCAA 
TTGATCCTAA CTATATAACT TACGTATTTA TTTGTAACAT TATTATACAT 
TCCTTTGTAT TATTATAACA GTATGATTTT ATTCTTTGAT ATACAAAGAC 
AAAGCCTGTC GAATGTTGTA TTCCTCTTAA TGGCCCGTCA CACCAATCTT 
TATTTGAGAA TATTTCGTAC TGAATCGAGA CTATTAATGA ATAGTTGTAT 
AATTGAATAC ATTCATCTTT CCATGATAAA CCTATCTATA AAGCATAAAC 
TTAAGTATCC ATGTACCAAT TGATATCGAG TCTTGTTGTA TGTTTAACTT 
TTTTTAATCA CGGATTGTTG GAAACCTGTA GTGGTTGTAT GGATAATATG 
TGTACTAATT ACTATATTAT CTAACATGCA CGATTTAAGT TTCGTATTAG 
TAAGTGTTGT TACAGTAGTA TAAGGATAGT GACGTCAAGC CGCTTGTGCC 
AAATTATTGT CTTGCGTTTT TTACCAGGAA AAGTTGGAAA AAAAAATCTT 
ACTTTTACTG CCAACAACTA GAAAAACAGT TCTCAGAACT ATTTGCTTTA 
ACATGGTTAA AAAAAACTAA TAACCGCATA CAATTCAAAA AGTGAGATGG 
AAAAATAGAG AGTNCAAGAG GTTCAACAAT TCACT

AT5G23090.3

Model type: Protein coding
Short Description: nuclear factor Y, subunit B13
Computational Description: "nuclear factor Y, subunit B13" (NF-YB13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.1); Has 1261 Blast hits to 1261 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 353; Fungi - 310; Plants - 511; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G23100.1

Model type: Protein coding
Short Description: Protein of unknown function, DUF617
Computational Description: Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR