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Mutant Lines
52-0567-1

52-0567-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 720932 [Map]; Strand: c
- AT5G03070.1 - [+] show detail - importin alpha isoform 9
  Distance: 0; Region: exon2 (CDS)
- AT5G03080.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
  Distance: -935; Region: promoter

GTGGGTACTA ATGGCGATGT TGAGGATGCT CTTGTTGAGA ATGAGATGAT 
GGTTGATGAA GAGCAGCCTA TATTGGAGGC TCAAGCCAGT AAATCTGTGG 
AAGAGCTCAA GTCCGCTGTT CAATACCAGT AAGTGAATCT GTCAATTTTT 
GTTTGTCATT CTTTTCGTTT TCTTCACTGT TTCAGGTATT GTTCGTGATT 
TTTTTCTGAT ATCTACTTCT TATCTCAATT TTCAGGGGAA AAGGTGCAAT 
GCAGAAGAGG GTGACTGCTC TTCGGGAACT CAGGCGTTTA TTATCAAAAT 
CTGAGTTCCC TCCTGTTGAA GCTGCGCTCC GTGCTGGTGC AATACCTTTA 
CTTGTGCAGT GTCTTTCATT TGGCTCCCCC GACGAACAGG TTACATTTGC 
CTTATATATG CTTTAATACT ATACCTTTGT TCTTGCATTT ATTTGCTTAT 
ATATTCGTCC GGCACTTTAC TGTAGATTTT GACAAGTAAC TCATGCATTG 
AAAGAAGATA TATTAAGGAG AGTTGTAATC TTTTGATCAC AGTTCTGTCT 
AACTGCAGTT ACTTGAGTCA GCTTGGTGTC TTACCAACAT TGCTGCTGGA 
AAACCTGAAG AAACAAAAGC TCTATTACCT GCATTGCCGT TACTCATTGC 
TCACCTTGGA GGTTTTGTTG TACTGGCCAA CCAAGTCTGG TATTACTCTA 
TTGGTTTTGG TGGATTAG

3 prime edge [+] show sequence

Chromosome: 5; Position: 721048 [Map]; Strand: c
- AT5G03070.1 - [+] show detail - importin alpha isoform 9
  Distance: 0; Region: exon2 (CDS)
- AT5G03080.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
  Distance: -819; Region: promoter

GTACCCACCC TACAAAGCCG CTTTGCCCTA ACCAGTAATT CCCTTCTTTC 
CTTCGCCACT GTAACAGCTT GTTGCCGTCT TCTTTGTCCC GCAACATTTC 
CAACTACACA CCACCATTTC CAGAATTACA ATCAAATCCA TGCCACCAAT 
TGTAAATTTA TATGGTTCTG AACTAATCAA TATACATGAA AAACCAATAC 
TAAAAGGAAT GAAGAATCTA AATTTGTTCC TACCCTAATC ACCAACTAAC 
CTAATTATCT CGAGAAGCAA ACAAAAACAC TACACTAACA CTACTCAGGT 
GCCAAAATCA AGTTGAGGGT TTACAGTAAA AGTCAGAAGG AAAATCACCT 
GAAGACTTTA TTGGGTCCCT TCGATTAGAG GCGGAGCCAT CATCCGCCAT 
TGAAGAAGCT

AT5G03070.1

Model type: Protein coding
Short Description: importin alpha isoform 9
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G03080.1

Model type: Protein coding
Short Description: Phosphatidic acid phosphatase (PAP2) family protein
Computational Description: Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); Has 881 Blast hits to 875 proteins in 378 species: Archae - 15; Bacteria - 412; Metazoa - 127; Fungi - 150; Plants - 85; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).
Link: InterPro Scan - TAIR