1. Home
  2. Mutant Lines
  3. 52-0697-1

52-0697-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17759611 [Map]; Strand: w
      • AT3G48100.1 - [+] show detail - response regulator 5
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 52-0697-1 - 5-prime edge 
    GTCACCGGCT TATATAGAAT CAAATCTCAA GAGAAGATCT TGCTTAACTT 
    ATGATGGATT ATTCTTTTCT AAATTTATGG CCACAAGATA AATTTTATTA 
    TTCCTAAGAT CCATTTTAAA AATCATTTTA GGACCCACTA AAATAAACAC 
    CAAATCTCAG CTTGATCAAA TATACAACCA CCACCAAAGT TAACCCCATG 
    AAGTTAAAAA GTAATCATAT AATAACCTTT TTTATCATAA CAAAATCTTG 
    TGATTATACA ACAATTTAAT TTAGTCAATA CATATCCTTT AACGGTAACT 
    TTATCACAAA TCCTAAATTA GTGTGATTAC TTTAAAAAGT TTCCTAAACA 
    AACAATACCC TCTAAATCTA ATCATCCCCA TCTCCTGAAG TAATAAATGC 
    ACAAAATCTA CTATATTTGG TAAATTTTGG TCCTACATAA TCTTGACCTA 
    AACAAGAATT AAGGATCATA GTTAAGATTA TTATAGTAGA ATATACCTAT 
    CGATACGAGG CAAGATGTTC TCTGAAGACA TAATCACAAC TGGTATTTCT 
    CTGAAAGCTG ATGATTCCTG TTAAAAAGTT CAAAATCCAT AAACAAGATT 
    AGATCAAAAC TTCATTTTAA TTTTCTTAAA ACAATTGAAT CATCAACAAA 
    ACTTACTTTG ATCTTCTTCA GCAGTTCATA TCCAGTCATC CCAGGCATAG 
    AGTAATCCGT CATTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17759495 [Map]; Strand: w
      • AT3G48100.1 - [+] show detail - response regulator 5
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 52-0697-1 - 3-prime edge 
    CCGGTGACAT GTTAGGCCCT CCAAAACTTT ATAATATATG TTTTAATTGT 
    TTGGGTTGCA TAATCTTAGG TAGGGTCATT TATAAAATCC CAATCCTCGT 
    GATAGACACC TCACATGCCT TTGCTTATTA CTAAGGAACC AAACCCTCTT 
    TACCAGATTA AGTTTAATGA TTATCATATA TGAGCTGGCC ATTTTCTGTA 
    TCCAAAGTTA TAAACTTTAT GGAATTAGAT CACTAACATT TGGTTCCTTA 
    TATTTATTCA GATGTCTTGA AGAAGGAGCT GAAGATTTCT TATTGAAGCC 
    TGTGAAATTA GCTGATGTGA AGAGATTAAG AGATTCTTTA ATGAAAGCTG 
    AGGAAAGAGC TTTTAAGAAT ATTATGCACA ANANAGAGCT TGAAGCTAAT 
    GATATCTACT CGCAGCTNAA ACGCGCNNAG ATNAANANNC CGGGCCGGGG 
    NCNNNNCNNG

AT3G48100.1

Model type
Protein coding
Short Description
response regulator 5
Curator Summary
Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.
Computational Description
response regulator 5 (RR5); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 6 (TAIR:AT5G62920.1); Has 45766 Blast hits to 45301 proteins in 2636 species: Archae - 240; Bacteria - 40380; Metazoa - 18; Fungi - 471; Plants - 1420; Viruses - 2; Other Eukaryotes - 3235 (source: NCBI BLink).
Link
InterPro Scan - TAIR