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52-0745-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30335664 [Map]; Strand: w
      • AT1G80710.1 - [+] show detail - DROUGHT SENSITIVE 1
        Distance: 0; Region: exon1 (CDS)
      • AT1G80720.1 - [+] show detail - Mitochondrial glycoprotein family protein
        Distance: -474; Region: promoter
    Flanking Genome Sequence: 52-0745-1 - 5-prime edge
    GCCTCTGGTG CGTAGAGACA TTCGGATAAC NGTGGGCGTT GAAGCAGGTT 
    TGGGCTTCTT CTTCTTAAAA GATTTAGAAT CATCTCGAGA GCGTTTGGCG
    GCGGAGAGAA GAGAAGAAGC TTTGGCGCGG ACATTGAGAG CAGCCAACAT
    CTCATCGTTC CGTCTTATGT TCTCCAATCT CTTCCGCTCG TACTCCGTCG
    CCATTGATTG ATTGATGCTT GAGAAAATTG AGATTTTTTC TCTTTACACA
    CAAACAAAAA AGGAGAGATT TTTTTCTTCA CACCAAAACT GAAAGAAGAC
    CTANAAGAAA AAGAAAAAAG CTAACAACAT TTGATGGGTC GGAAATAG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30335551 [Map]; Strand: w
      • AT1G80710.1 - [+] show detail - DROUGHT SENSITIVE 1
        Distance: 0; Region: exon1 (CDS)
      • AT1G80720.1 - [+] show detail - Mitochondrial glycoprotein family protein
        Distance: -587; Region: promoter
    Flanking Genome Sequence: 52-0745-1 - 3-prime edge
    GGTCCAGAGG TTTGAATCCA GATTCCGCTG GCTTACCTGA TGGCTTTTCA 
    GATTTCCGGA TGGGTTCTCA GATCACACAC AACCAACCAT CTCCTCAGAA
    GCAATCGCCG CGTCTTTTGG CTCCTATTCC CTTCGAATCC GCGTATGAAG
    GATACGGTTC TTATACGCAA TTGGTTGATA CTCTTTTGGG TATTGAGAGT
    AAGTCTTGTA GAGGCAAATT GGTTAAGGGA GAAATTGGAG TGGTTAAGGA
    TGAGAACGAG TCTCCTATGG TGAGGACTAG GAGTAGTTCT CGTGTATCTA
    AAGTTTCTGT TAAAAGGAAG AGCCTGAAGA TGATTCCTTC AGTGATTATG
    TGAACAAGGA TTTAGTNTTC CGGTAAGCCT GAAAAAATGA GTTTGATCTG
    GATTGGTGAC TTTAAAACCC NAAATGTACC TCGGTTGNNC CNGGAGGANT
    TTTGTTGCCC ATTNTTACCT TCAAAAATTT AAAANGGTNG CTGNNGGGNN
    AAACTNGGAA ANTGGGGTTT GGAATTTGNA TTGGGGAAAG AAAANNNNAN
    GGGGGGAATT TTTTTNCCCC CCCCCTNNCC CNNTTTTTTT TTTTGGTTTN
    NAAAAACCTT TTTTAAGGGG ANTTTTTTTN AAANACNNNN NTTTTT

AT1G80710.1

Model type
Protein coding
Short Description
DROUGHT SENSITIVE 1
Curator Summary
Encodes a WD
Computational Description
DROUGHT SENSITIVE 1 (DRS1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: damaged DNA binding 2 (TAIR:AT5G58760.1); Has 13978 Blast hits to 9952 proteins in 465 species: Archae - 46; Bacteria - 2948; Metazoa - 4636; Fungi - 3015; Plants - 1520; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80720.1

Model type
Protein coding
Short Description
Mitochondrial glycoprotein family protein
Computational Description
Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G15870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR