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52-0802-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7809011 [Map]; Strand: c
      • AT5G23200.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0802-1 - 5-prime edge 
    CAGAAAACGA CGTCGCACTA ATAGTCCAAA GAAAACCGAG GAGCATGTTT 
    TGAAACAGAG CCTTTCAAGT TTCATTAAAA CATAAAAGAG AACTTTAGCT 
    CCATCTTCTC CGATCTTCCT CTTCGTTAAC CGGAGTATAC CAATCTGGTC 
    GTCTCTTAGA GTTGCTCAGC CTGTAATTCA GTAATAGTTC CTCATTACAC 
    AACGACCTCG TTGCCACTAA CACCAGTGTC TTCAGAACCG GGGCTTCTAA 
    CCCGTCTTTA CTCCCTGTCT TGAACCAGAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7809046 [Map]; Strand: c
      • AT5G23200.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0802-1 - 3-prime edge 
    GTTTTCTGAG TGTTTCACTA TTTTGGTTTT TCGATTATTT TTGGAAGACA 
    TTTTATTCTA ATCTTTTAAA GACATTTATG TTGTTCGGTT GTTACATAGA 
    AAATGTGCGA AGAAATCTTT GTTATTTGAT CTTTTATGTT GTTCTGTTGG 
    GTTTCTATAG CCTTTAGGAT AAATGGACGA AGAGCACCAA ACGAATCTGT 
    GATGAAACCA GAGCCTGCAA CTTCGGGAAA TTACGTTATG CCAATGCATT 
    ATAGAGTTCT CAATGGATGA TTGGAAGTTG GAACAATGGT GATGATCTGT 
    GTTGATGAAT GTGTTAACTG AAATGACTTA ATGATGGATT TGGTTTTGTA 
    GTCAAAATTA TTGAATTGAA CGTTCAAAAG TTATCGGAAA ATATGACTAG 
    CGAATTACCA CAAAAGGGAT AGCGAATT

AT5G23200.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR