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Mutant Lines
52-0980-1

52-0980-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 6930769 [Map]; Strand: w
  - AT5G20490.1 - [+] show detail - Myosin family protein with Dil domain
    Distance: 0; Region: exon23 (CDS)
  - AT5G20490.2 - [+] show detail - Myosin family protein with Dil domain
    Distance: 0; Region: exon23 (CDS)
Flanking Genome Sequence: 52-0980-1 - 5-prime edge
```
AAAAAAAGGT TGATATCATG CCAGTGTATG GAAATGAACT TACTCTCTGT 
GNCTNTCCTA TNTGTAAACG CCATGTTAAT TCCNCAACAC GCNTTTCAAG 
TTTGTCTTTC GCCTCTCTAT GATACTCCAC TAA
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 6930704 [Map]; Strand: w
- AT5G20490.1 - [+] show detail - Myosin family protein with Dil domain
  Distance: 0; Region: intron23 (CDS)
- AT5G20490.2 - [+] show detail - Myosin family protein with Dil domain
  Distance: 0; Region: intron23 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
TACGTTTTTA CACAGTCATT GATAATCCCT GCTAATATAG ACCGAGCTGG 
AAGAAGCAAA AACCCAAGAA TACGCAAAAC AACAGGAGGC TTTAGAGACA 
ATGCGGTTGC AAGTTGAAGA AGCAAACGCT GCTGTAATTA GAGAGCGGGA 
GGCTGCAAGG AAAGCTATTG AAGAAGCACC TCCAGTCATT AAGGAGACTC 
CCGTATTGGT TGAGGATACN TGAAAAAATC AATTCATTAA CATCAGAGGT 
GGAAGCTCTA AAGGTATGTG TTTTCACGTA TTAGACCATC CGTAATGTAT 
ACTAACACAG TTAGTAGATA TATGTTCATT AGTCTCTTAA TAACGTGAAG 
TGGATTGGTT GGTTTAAATC ATCTTTTATT ACAGGCTGAA CGACAAGCCG 
CAGAACATTT GATAAAAGGT TTCTCTGCGG CAGAAGCTAG AAATTCCGAC 
CTGGCGACAG AGCTTGAAAA TTTCATCAAG AGGCACTTGC TATTTCGCTA 
ACCAGCAGAA CTATGGCCAC ACAATCAAAA ACAATGCTTT TACCGGTGCC 
TACAACATGC ACTGTTTTTC CTCATTGTGG TTTATAAAAT TTCAAGATGG 
CCTGTTTGTT AATGTAGTTT TTTTCTTTTT TTCTTTTCAA TGTTCAGAGA 
ACTCCAGAGA ATGGAAATTA TCTTAATGGA GGAACAAAAA CTACCCCGGT 
AAGGGGAAGT GCATTTTCTG ATTAATTGCA CGTN

AT5G20490.1

Model type: Protein coding
Short Description: Myosin family protein with Dil domain
Curator Summary: Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.
Computational Description: XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 40570 Blast hits to 26875 proteins in 2480 species: Archae - 466; Bacteria - 5527; Metazoa - 21427; Fungi - 3168; Plants - 2202; Viruses - 135; Other Eukaryotes - 7645 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G20490.2

Model type: Protein coding
Short Description: Myosin family protein with Dil domain
Curator Summary: Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.
Computational Description: XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink).
Link: InterPro Scan - TAIR