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52-1161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20980128 [Map]; Strand: c
      • AT3G56630.1 - [+] show detail - cytochrome P450, family 94, subfamily D, polypeptide 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-1161-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAT TTGTATCCAC TGGCACTGGC GGATACAATC 
    GTAGAGATTC AGTTATCGCT GCGTGAAGAT AATTCATCAG TTTAAGATCT 
    TCAAACCCGT AAACTTCCCC GATTCGCTTC CCTGTTCGTT CTCGAATCGA 
    GTTTAGCTCT TGTAGAATCT TATCTTTCAC TTCTGGATGC ATAGAGAGCA 
    ACCAAAAGAA CCAGCTCAAA GCAGAGGAAG TAGTGTCTCG TCCTGCAAGT 
    ATGAAACTTA TGACAATATC ACGAAGTATC TCCGGAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20980126 [Map]; Strand: c
      • AT3G56630.1 - [+] show detail - cytochrome P450, family 94, subfamily D, polypeptide 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-1161-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACGTC 
    ATACAATGAG TTGTGCTGAG GACAATGTGT TGCCTGATGG GACATTTATA 
    GGGAAAGATT GGGGGATAAG CTATAACGCG TATGCGATGG GGAGGATGGA 
    GAGTATTTGG GGGAAAGATT GCGATCGGTT TGATCCTGAG AGGTGGATTG 
    ATGAAACAAA TGGTGGTTTT AGAGGTGAGA ATCCTTATAA GTTTCCTGCG 
    TTTCATGCGG GACCAAGGAT GTGTTTAGGG AAGGAGATGG CTTATATTCA 
    GATGAAATCG ATAGTCGCTG CGGTTTTAGA GAGGTTTGTG GTTGAGGTTC 
    CAGGGAAGAA GGAGCGTCCT GAGATTCTAA TGTCGGTGAC ACTTAGAATC 
    AGAGGAGGTT TGAATGTGAG AGTACAAGAA AGATCTTGAG TTACTTGTTG 
    TAGAAGCAAC CTTTGTTTGC TCTTCTCATA TCTTATAGCG ACCATGACCA 
    TATTTTACTG TAAACAAACA CGTTTTAGTG GATTATCAAA ATACATTCTT 
    GGTGTGACCA ACAATGGTTG AACTGAAGTC GTGCACGCAG GGTCACATTG 
    CATTTCAAGT TTAGTTTCAT TTGTGTGCAT TCGTGAGAAG TGTGAGCTTT 
    CTTCTTGACT AAAGCTCGAA CAAATCTTGG TCTGGGATCT TCAAAAAACA 
    TAAATTAGTC TCACTTGGGC TCTATCCTCC TAGAGCATAA CGGAGTCAAG 
    ACTCTTGGTA ATCAATAGCT GANCTATCA

AT3G56630.1

Model type
Protein coding
Short Description
cytochrome P450, family 94, subfamily D, polypeptide 2
Curator Summary
member of CYP94D
Computational Description
"cytochrome P450, family 94, subfamily D, polypeptide 2" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink).
Link
InterPro Scan - TAIR