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52-1243-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9054986 [Map]; Strand: c
      • AT5G25940.1 - [+] show detail - early nodulin-related
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 52-1243-1 - 5-prime edge 
    GTTCCAAACA AGGTCTCTTC TTCTTTCTCC GTCTCTCTCT CTCTTTTTTT 
    CCCTAAAAAA ATCTTTTAAA TTGATGACTT TGGATTATGT TTACAGCCGG 
    AGCTATTGCC GGAGCTAAGG CAGCCGCCGT TGCCGCCGTC GCCAGTGCGA 
    TTCCCACAGT AATCATATAA TCTCACTTAT CTAAGTTTTT TAAATTGAGA 
    TCTTAAATGA ATTATGATGT AAGAGTTATG TTTCTTTGTT GTTGAATTTT 
    AAGACAAAAG TGACTCACCA ATCTCATGTT CTGTAATAAT CAAGAGTTTC 
    AATTTTGTTA CCTATTCATT TTGTGATTTC TGAATACACC AAGTAGAGTC 
    ACATTCTTTT TGATGTGTGT ATAAGATATG AATTTGGTAC ATAAGCATGC 
    CTTGTTTTCG TAACAGGTAG CTGCCGTTCG TATGTTCCCG TGGGCTAAGG 
    CAAACCTCAA CTACACTGCT CAAGCACTCA TTATTTCTTC AGGTTAGCTC 
    TATCAGCAAT ATGCCTTAAA TCATTACTAT ATGTTCTTCC TGGAACTAAG 
    TAGAAAAAAG ATACTAGCTT TAACATTGTT GTAGAAACCT CGAACTTCCC 
    TTTTGAACCT AGTTGAGTTT GGGGTTTTTA AGTATTCGTA CATTCATTTC 
    TCCACAATTT TCTTCTGATT TCTATCTTGN GATTATGGNG ATCATTGGAA 
    CAGCTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9055102 [Map]; Strand: c
      • AT5G25940.1 - [+] show detail - early nodulin-related
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1243-1 - 3-prime edge 
    TTTGGAAGTT TCGGCTCGAT GGATCTTAGC AATCTCGTCG GGAGAAGCTA 
    TGACGAAGAG ATTCTGCTGC CTCCGGTTAC CCATTTCTGA CCGGTTTTCC 
    ATTTTCAGTG TCGCTTTTTT GATCTTTCGA TTTCAAGGAG AGAGAGAGAG 
    AGAGACGGGT CGCGATTTGC CTTTTTCTTT GGTTAGGAAA TAAATGATTA 
    GGACGAAAAT TAAAAATTCG TTTTTTTTTT TANAAGNGGG NANTNTTNCC 
    CCAAAANANN NAACCCCCAN TTTNNAAAAN AANGTNGNAA AAANNNTNTN 
    NTNTNNAAAN CCCCANTTNA AAAANGTTTT NNAATNNTNT TTTNAAAAAA 
    NCTNGGGTTA AAAANCANAN AAANCATTTT TTTNGTTANA AATTTTTTAA 
    AAAAAAAAAA AAATNCAGGG GTNCNAAAAN GTTNGTTNTN NAAAATNTTT 
    AAAATTTNAA ATTTTNAGTT TTTTAAANNC NNAANANTTT TTNGGNGNGG 
    TTTNAAAAAN CCCNTNAAAA AANGTNGGGN GNNANTTTTG NNNCCATCCG 
    GNTTTTTTTA NAAATNNAAA AAATTAANCG ATNCANTTTT AAANAAANTT 
    TNTAGGGGAA AAANTGNTTA AAAAAAATTT AANAANTNNN NNAATTCCNT 
    TAANGAGNAT TTTTTGGNAA AAAAANANAA ATAAAACCTT ATTTTTNTTT 
    GNGATAAAAA AAGNANTTTT TAAAAAAG

AT5G25940.1

Model type
Protein coding
Short Description
early nodulin-related
Computational Description
early nodulin-related; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Early nodulin 93 ENOD93 protein (InterPro:IPR005050); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR