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Mutant Lines
53-2619-1

53-2619-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 7668063 [Map]; Strand: c
- AT5G22920.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: 798; Region: intergenic
- AT5G22930.1 - [+] show detail - Protein of unknown function (DUF1635)
  Distance: 166; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGNATTTT 
CACATCCTAC TTTCATCCCT CTATTGTGGG TTTAGATTTA GCAGTGATGA 
GAAAGTAAGA AAAAAAAAAC TCCCCGGGTT AAACTTCTNA NCTTCANNGA 
ANAGTTAATN CTAAGGGANA NAGTTGGCTA GTTAACTTCT TTCTCTAGTT 
ATGCCTGGCT ATTTTNGTNG NNGGNGAGGG GGGGACCTTN NATTNCCCNA 
ANNNNNCCCC ACGGGNTNGN NGNGGGAAAN CNCNTANAGN NCAAAANAAN 
CCCCCCNNTT NNTTNCCAAN NANGGGGCCN NACAGGAANG GAAAANNGGG 
GTTTTGGGGG GGNGANGCNN NCCCCCCGNC NNNNNNNNNG GNNTNGNGGG 
GGGNNNNNAA AAAAANNNNN CNNNNNNANN NNNNNNGTNG GGTTANCTCT 
TNATNAAACN AAAAGGGNAA CCCNGGGGGG T

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 7668076 [Map]; Strand: c
  - AT5G22920.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
    Distance: 811; Region: intergenic
  - AT5G22930.1 - [+] show detail - Protein of unknown function (DUF1635)
    Distance: 153; Region: intergenic
Flanking Genome Sequence: 53-2619-1 - 3-prime edge
```
GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCAACC 
AAAAGCCCTA ATGTACAAAA AGATCACTCT CACTTGAACA CTAGAAGTGA 
GATTAATCTG GAATTGACCT ATGTATGTAA TGGTATATTA GATGACTATT 
AGTACTACTT GAGTAAGATA AAAGATCAGT AGCCAGAAAT GTTTTCATTG 
CCCGGTCATT GGAGAAGAAC TTTCTGATAC TTAGCTTCTG AATAGGATC
```

AT5G22920.1

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G22930.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1635)
Computational Description: Protein of unknown function (DUF1635); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1635 (InterPro:IPR012862); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1635) (TAIR:AT3G44940.1); Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR