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53-2653-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7147170 [Map]; Strand: w
      • AT1G20630.1 - [+] show detail - catalase 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2653-1 - 5-prime edge 
    AACATGCTCA TGCTCATGCT CATGCTCATG TTCTAATACA CAAGTCTTAA 
    GGCTGACGTG ATCTGTCAAT ATCGTTGTAC ATGTTTTAAG GTTTCTTTAC 
    GATTTTTTTA AAGTTATTTT AATCACCTGT GTTCAAATTG TGAATATCAT 
    TGTTGCTTGT ATCGTATTTT TTTAATTGAT CATATATACT TATGTGGAAT 
    TGTTATGTAT CAAGTATCAA TGTATCATTA TTTGTCATAC CGNCNNGACG 
    CGCTACANCN GNNCACGNNC NNTCANTNTA NNNCNNTNCN NNNNNANCGN 
    ANNTNAGNNG NTNCCAAATC CCNGGNNGNN NNNNNNTNGN NANNNNGNAA 
    ANCANNAANA AAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7147060 [Map]; Strand: w
      • AT1G20630.1 - [+] show detail - catalase 1
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2653-1 - 3-prime edge 
    AGCATGTTGA CAAATAAACA ATCAATAGAC GGAAAAACAT GTTGAATTTT 
    CCAGTGGAAT CTTCAACGCA TGCAAATCGA AACCCAATCT CCACTATATA 
    ATAAAGAAAT CGATTCACAC AAAAAAACCT CAACAAGTAG AACAATCACC 
    CCAATTTTGC ATCATTTTAA CCGAGAGAGA GAGATCATTC ATACACTTTG 
    GATTCAACAC GAAATCACAC CAAATCGATA CGAAATCAAG TAAGGTAAAA 
    TCACAGATTA ACAAAAAAAG AGAATCAATC GATGTACCCT GTATGGATC

AT1G20630.1

Model type
Protein coding
Short Description
catalase 1
Curator Summary
Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.
Computational Description
catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
Link
InterPro Scan - TAIR