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53-2664-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24062805 [Map]; Strand: w
      • AT5G59720.1 - [+] show detail - heat shock protein 18.2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2664-1 - 5-prime edge 
    TCTGCGTTAG CAAACGCTTC AACCGCTCGT GATGTGGCAG CGTTTACAAA 
    CGCAAGAGTG GACTGGAAGG AAACGCCGGA GGCACACGTG TTCAAAGCGG 
    ACTTGCCAGG GCTGAAGAAG GAGGAAGTCA AGGTTGAGGT TGAAGACAAG 
    AACGTACTGC AGATTAGCGG AGAGAGGAGC AAGGAGAACG AAGAGAAGAA 
    CGATAAGTGG CACCGTGTGG AGAGAGCTAG TGGGAAGTTT ATGAGAAGGT 
    TTAGGTTACC AGAGAATGCA AAGATGGAAG AAGTGAAGGC AACAATGGAG 
    AATGGTGTGC TTACGGTTGT GGTTCCGAAA GCGCCTGAGA AGAAGCCTCA 
    AGTCAAGTCC ATCGATATCT CCGGGGCTAA TTGAATATGA AGATGAAGAT 
    GAAATATTTG GTGTGTCAAA TAAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24062689 [Map]; Strand: w
      • AT5G59720.1 - [+] show detail - heat shock protein 18.2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2664-1 - 3-prime edge 
    AACGCAGAAG ATGGCGTGAA GAATCCTTCG AATGGATCCC ATAAGTCTTG 
    CGAGAACGGA TCAAAGACGT TTGATCTGCG TCCTCCAAAA ATGCTTGGAA 
    TGAGAGACAT TGTTCGTTGC TTTTCGGGAG ACTTTTGGTT CTTGATTTTC 
    CTGCTGATTT GATCTGATTT CTGAGATTAG CAAAGGACAT ATTTATAGGG 
    AAGTTAGAGG ATGAAGAGAG AATGTTCTTC GAGTTTCTTG AATAGAATAG 
    AAAATGCTCC TTTTTCTAAA ACCTTCGCTT GGAGTCTTTA GAACACATAC 
    ACAATGATCA CTGTGGTGAA ATGACCAGAT TTTTCTTGGC ATTTCAGGAA 
    GTTTCGTTTG TTGAAACAAG ACCGAAATGC AATCCTTGGT TACAATTAAA 
    ACTACGTGCC GTTTTGCTTT GTTGTTGTAT TATCCTCTTC GAGATACGGG 
    CTCAGTGAAG CGGATCTTCT TTGCAAAAGC CCATTTCTTA ATAGGTCGGA 
    AGTGGAATTT AAGAAAATCT AACTCAGAGA AAAGAGGACA AAATCAAGAT 
    TTAAGATTAT

AT5G59720.1

Model type
Protein coding
Short Description
heat shock protein 18.2
Curator Summary
encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.
Computational Description
heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR