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Mutant Lines
53-2744-1

53-2744-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 1074609 [Map]; Strand: c
- AT3G04090.1 - [+] show detail - small and basic intrinsic protein 1A
  Distance: -449; Region: promoter
- AT3G04100.1 - [+] show detail - AGAMOUS-like 57
  Distance: -690; Region: promoter

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCG CGTTGGAAAG CTAGTTAAAG CTAATAGAAT 
TGAAGTCAAT ATATAAACAT AAAAAAAAAA TTTAAAAATT TAATTTTAGG 
TTAAAATANC CTTTAATCTA TTTTCTNTAA AATANCAATA CCCTTANGGG 
ANGCAATTTA TCCTTATAAA TTNCCAAATT TNTNTANCAN GAACCNCATG 
AAAAATNTTT CCTNTCNTAG GCTNCAGCTA GCTAATNTAA AATAAAATCC 
NCNCTTTTTA TNTGCTNAAT TNAANCNCTA ATTNTTANCT CTAATAAANC 
CTAGTTNAAG NCCNCGTNTA ATTNCANCNG ATNTTCAATA NCTAATAATT 
NATNTNTTNG TNGCAATCTN TGTAAAACTN TCGGTTAGGT TAATCNTTCA 
AANATNTCTT CGTTTCTTAA ACCAGGAAAA AACCAAAAAA AACCAATTTT 
TCAAAAAAAA AAAANTNTTT TNGNGGNAAA AAATANCTGG GAAANAAAAA 
NCTAAANAGG NNACNTCCCC CCCNCCTANC CNCANCCNNA TCCCCAAAAA 
ACANAAANCT TTNTCNNTCC AACCCCCAAN GANAAAAAAN CAAAANCAAA 
AATGNTGGGN GTGTTNAAGT CGGCNATTGG GGATNTGTTG ATGACCTTCT 
NTNGGGTNGG CCTTNCCGTT NCCTTTGGAA TT

3 prime edge [+] show sequence

Chromosome: 3; Position: 1074657 [Map]; Strand: c
- AT3G04090.1 - [+] show detail - small and basic intrinsic protein 1A
  Distance: -497; Region: promoter
- AT3G04100.1 - [+] show detail - AGAMOUS-like 57
  Distance: -642; Region: promoter

ACAACGGTAG TAATTTCAAG TCAAACGGAA TATTATAGCA ATTCTATTAG 
TTTCAATTAG CTTTCCAACG ATAGTGATTT CAAGTCAAAC AAAATATTAT 
AGCAAAAGTT ATGACTAATC AAATGAACGG ACNTTATACT AATACAAAAA 
AGTTTTATTT TTTAAATGAA ATTTGATAGA AAAATAAGAT AAATTTGGAT 
TTTGAAGTTT TTTAAAAAAA TTATATGACT AATCTACAAA AAAATAAGAA 
TATTATGGAC AAATTTTGTA GTAGATATCT TTTATATCAA ATTTTTCCTA 
TTTTTTTTGT AACAAAAGAA TTTTGGATCT GAGGTATGTT CCCTGTAAGG 
GATACACAAA CTCGTAATTA CCTAAAAGAA CATTCCTCCT TGAATGGTCA 
ATTAGCCTTT ACACCAGCTA TTACACCAAT NGGGTTACCA TAATAGTTTC 
TTGAC

AT3G04090.1

Model type: Protein coding
Short Description: small and basic intrinsic protein 1A
Curator Summary: Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.
Computational Description: small and basic intrinsic protein 1A (SIP1A); FUNCTIONS IN: water channel activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT5G18290.2); Has 2436 Blast hits to 2434 proteins in 334 species: Archae - 16; Bacteria - 100; Metazoa - 613; Fungi - 43; Plants - 1566; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G04100.1

Model type: Protein coding
Short Description: AGAMOUS-like 57
Computational Description: AGAMOUS-like 57 (AGL57); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: antipodal cell, embryo; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 59 (TAIR:AT1G28460.1); Has 5663 Blast hits to 5663 proteins in 656 species: Archae - 0; Bacteria - 0; Metazoa - 626; Fungi - 298; Plants - 4676; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link: InterPro Scan - TAIR