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53-3112-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 400510 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 53-3112-1 - 5-prime edge 
    AAGACGAGTA AAAAGAGTTT ATGACAGTAG TCTGTGCAGC TAAGATTGAC 
    AATAATAATA CCCTTAAACG TTTACTTACC TATTTGTTCC TCCAGACAGA 
    TTGTTTCCTG TTGAAACCAA GACTCGAAAT TAGCATATCT GGTTGAGAGA 
    ACATGTGATC AAAGTTATAT TTGGGTCGAT AAAATACCTT GCTTCATATG 
    CATAGAAGAA GTCACATCAC TATCATTGTC TGATGAACTA TCTGATGGTG 
    CTTTAGTGGA GTCACTCGTA GTCGTCTTAG ATTCATCCTC CTCAGCATCC 
    TTGAAGAAAT TCGTTGTACT TTTGTTCGCT GTGACTGAGT TAGAGATTTT 
    CTTCACAGCT TTCTCCTTGT TGTTGACATT CATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 400626 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 53-3112-1 - 3-prime edge 
    CTCGTCTTGT GAACAGGTTA TCGGGGAGCC TGCAAGATAT CGTAAGAAGC 
    TCAAAAAGTT ACAAGGCGGC AAAACTGACA GCTTCTCAAT CACAATCCGA 
    TGCATTGGAT GATGAGAGCC TTGCGAAAGA TGTTGTCCCA GATAGCCAAG 
    CCGTCATCTA AGTTTTATTG ATTATCCTTT TTGATTCAAT TTTGACCAAA 
    ACCTGAAAAA GATGCTCAAA TCTTCACATC ACGGTTTTGT ACTTTTGTTG 
    CTTGTTCTAA CTAATTCTGG TATGGTGCTT CTTCTTTGAC ATTTTATGTT 
    AATCGGAAGT GCTTTATAAG AGGTACTATT GCAACAGCTA AATGTTAAAT 
    CTCGTCTCGG TTAATCCTCT GTGTTTGGTT CCATAATACT TGAATCCGAG 
    CTTTCTTGAG CTTCAAGATA ACAAATCCTT CAACTTCAAC ATGTTAAAAT 
    CAGTAATCAC ACAAAACCTA CACTAAGAAT CAATGGTTAA AATCAAATAC 
    ATTGTGTTTC TTTTTCCCTT TCTTATACTT GCAATCACAC AACTTGAATA 
    AACTTACACA TGAAACTATA ATACGTATAA ATATAACTGA AGCATCAACA 
    TGGTTCAGAT TTTCCTGATA TTAGCTCACT TGTTCAAAAG AGAGCTTAAG 
    CACCAAACAA CCTGAAACTC AATAGCGACT GTGTTCGCTT CGAGCTGTAA 
    AAATATGAAG AAAATACCA

AT4G00930.1

Model type
Protein coding
Short Description
COP1-interacting protein 4.1
Curator Summary
Encodes COP1-interacting protein CIP4.1.
Computational Description
COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link
InterPro Scan - TAIR