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53-3937-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 246072 [Map]; Strand: w
      • AT3G01660.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3937-1 - 5-prime edge 
    CTGTTTTGTG TTCTGTTGGT GTACAGTATC TACAACAACC CGAAAAGGTA 
    CGTTACCGTA AACCAAAACC GATTTCGGTT ATGTCAAGAA GATTCCTAAA 
    CCGGGTCTTT ATTATATAAA CCGCAGGTGT TTGCAGAAGT GTATAGAGTG 
    TTGAAACCGG GAGGAGTGTT GATAGTGAGT TTTAGCAACC GGATGTTTTA 
    TGAGAAAGCA ATTAGGGTTT GGCGTGATGG AACCGAATAC AGTCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 245956 [Map]; Strand: w
      • AT3G01660.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3937-1 - 3-prime edge 
    CAAAACAGCG TCGAAATACT TGTCTTCGAA CTCGAACTTC TGATCTTCAT 
    TAAGATCCTT GACGAAGAAG TAATCGAGTC TAGGGTTACG AGCAAGCTCC 
    TGTGCAGTTA AGACCATGCC CTACTACTTT CTCGTACTTC ACTTCTTCTG 
    GAAGATGGCT GACCCATGAG CTCATCAAGT CAAGTACAGT CGAACCGGGT 
    CTCAACCGGT TTCTGTATAG TTCGGTTAAG GAGGATATGA AACTATCATC 
    TACGTGGTTC ACNGAACCGT GGATATGAAT AGAATT

AT3G01660.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G29590.1); Has 1347 Blast hits to 1347 proteins in 403 species: Archae - 26; Bacteria - 759; Metazoa - 25; Fungi - 12; Plants - 94; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).
Link
InterPro Scan - TAIR