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53-4045-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5526318 [Map]; Strand: w
      • AT3G16300.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: -111; Region: promoter
    Flanking Genome Sequence: 53-4045-1 - 5-prime edge 
    TATGTAAACA CANCAGNCTA NANNCNTGGN ATAGTGCCTA ATGGAGTTNC 
    TANANNNCTG CCCGCNANGC TTNCATGGGC TCACNNGACT GNNTTNCAAN 
    NATTTCACGA TGGCATAGAC ATANNCTGCT CAAATACAAA CAACAAGGAA 
    ACGGGCTANA AGAGGAGATC CTTAATANTC AGATTNTATA CCAAATTTTT 
    AGCCGTCGTC AATACAAAAG ACAATTTGAA ACACCTCTTA CAATTTTTAA 
    TTTTGACCAC GCTCTAAGAT TTACTTAGCC ACTCTGCTCT CAAAAACTTC 
    AAACTATGTG TAAAGAAGAA TCATTCGGGA AATGCCATTG AAGTAGCTTT 
    TAAACACCGA ACATCAAGTC AAAGAACTTT GAGACCATTG ACTTTGACGG 
    AGAGGCCATA GCGCCACCAC TTGGTTGAGG AGAGAAAGCG CTGCCGTTTT 
    GCAAGTACTG AGGACGAGAC AGGGGTCGAG CAGTGTTTCT AGTGGATGAT 
    GGTGGAGGTA AAGGCATGAA TCCTTGGTTG TTGAGTCTCT CGTTTAACGC 
    TTGCTTCTGT ATTGGGTCTA CTGGCTTCAC TCCTACTATT ACAACTCCGT 
    TTATCATCAT CCCTGCTTTG TTCAGCGCCT TATGTGCATC AGACCGGTTC 
    TGTATCAAAT ACACAGACCA TTGTCAGTTC GTTGTTTCCT TTATATAAAA 
    GATTTGATTA GACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5526208 [Map]; Strand: w
      • AT3G16300.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: -1; Region: promoter
    Flanking Genome Sequence: 53-4045-1 - 3-prime edge 
    TTTATATATC CCCTCTCGCA TGTAAATTAC ATTACAAAAC TCAGTAACTC 
    ACAATGGCGA AAGCAGCAGA GCAGAAACAA AACCCGACCG TTGCGAGTGC 
    AGAAGCAGAA GCT

AT3G16300.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G79780.1); Has 429 Blast hits to 429 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR