1. Home
  2. Mutant Lines
  3. 53-4136-1

53-4136-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14302347 [Map]; Strand: c
      • AT2G33800.1 - [+] show detail - Ribosomal protein S5 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4136-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGC AGACAGCATC AGCTCTCTCA TCACTCTCTT 
    CACTCTCACT CCACACCCGA ACCTCTTCTC TCATCTCCTC TTCCTCCACA 
    AAACCCATCG TCTCTTTCTC CTCCTTCCTC AACCGCCGCT TCTCATCTCT 
    CACTCTCGTC AAAGCCTCAT CGACCGATAC CGAAACCATC TTCTTCGAAG 
    ACGAAACACC AGAAATAACC GCAAATGTCG TCTTCGACCC ACCAATTGCT 
    CCCGAAGGAT TCGTCTCTCC TCCGTATTTC GACGAAGGAA GCGACGAGAC 
    AGAGGAAGAG ATCGCTACCG CTTTTGAAGA GCTCTATGGA CCTGCGTATA 
    GTGGTGAGAG TATGCTTGGG AAAGATATTT ATGTGATGGA CTCAAAGCAT 
    AAGAAGAGTT CAGGTATTGG TGGGAAGCCA AAGAAAGATA AGATTAGAGA 
    TGGGTTTGAA GAGAGAGTTG TGCAAGTTAG GAGAGTGACT AAGGTTGTTA 
    AAGGAGGGAA GCAATTGAAG TTTAGAGCTA TCGTTGTTGT TGGTGATAAA 
    CAAGGGAATG TTGGTGTTGG GTTGTGCTAA GGCTAAAGAA GTTGTTGCTG 
    CTGTTCAGAA ATCTGCTATT GATGCTAGGA GAAACATTGN TCAAGTTCCT 
    ATGACTAAGT ATTCTACTTT CCCTCACAGG TAATCAAAGT TTTGGACTTG 
    ATGTTTGNAA TGNGTGTTAA TTGGTG

AT2G33800.1

Model type
Protein coding
Short Description
Ribosomal protein S5 family protein
Computational Description
Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink).
Link
InterPro Scan - TAIR