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53-4246-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 398402 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-4246-1 - 5-prime edge 
    TTTCCAGGTG CTCCGTTTAT CTCGTTCACA ATTTCTCTTG AAGCTGTGGT 
    AGCAGTAGCG GCAGTAGCAG ATAGATTGAT TTGATCTTTT GAGCTCTTCT 
    TTTGCCTTTT CTTCTTCTCA GTAACNTGGA GTAGATGTCA ACTCACTGTT 
    GGCCACCAAA TGATTTTCCG GGTGGCTCAC TAGAGTATCA GTTTCCATAT 
    TATTTGTTCC CACATCTTCG ACAGTTTTCA CACCCAACTC AGTTTCTACA 
    CAGAGTTAAC AAAATTCCCT GAAACATAAT TGTAGAGAAT AACTAAATTC 
    AATAAAGAAT TGAGATTACC TTTTTGTATT GCTTCTACAA GAGGATTTTG 
    AAGAGTTTCT CTTTCTGGGA TTGGAAGAGA TTTAGAAGTA GCATCAACAC 
    AATCTCCATT TCCAGGTAAT TCATTTATCT CATTCACAAT TTTTCTTGAA 
    TTTGTAGTAG CAGCAGCAGT AGATTGTTTG ATGTGATCTT TTGAGCCCTT 
    CGTTCGCTTT CTCTTCTTCT CTGTAGCTGG ACCAGTTGTC ATACCACTGC 
    TAGCTTCCAA CTGGTTATCC GCGTTAGTCA CCACTTCAGC AGTTTGAAGA 
    TTATCGAGAG CACTTGGAGC CAATCTTCTT CCTCACCTCT CTCATCATCT 
    TGNGATGTAA TCTGCCCATC TACAAGTTCT GAACAGGTGT ACTACCCTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 398518 [Map]; Strand: c
      • AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-4246-1 - 3-prime edge 
    CCTGGAAATG TAGATCGTGT TGATGCTACT TCTGAATCTT GTCTAATATC 
    ACAAAGAGAA AATCTTGGCA AAGGTAATTT CAGTTCCTTA CTGAATTTAG 
    TTATCCTCTA CCTTTACAGT GAGACTTCAG GGTTTTTTTC GTTCGTGTAG 
    AAAATGAGAT TGGTGAGAAG ATTAAGGAAG ATGTGGGAAG CGGAAAAGCT 
    ATACCAAGTT CTGCAGATAA TATCCAGACC GATAAACGGG TGAGCTACCC 
    AGATAATCAG TTGGAGGTTA GCAGTGGTTT GACAACCGGG CCAACTACAG 
    AGAAGAAGAA AAGGCAAAAG AAGTCCTCAA AGAATGACAT CAATAAATCT 
    ACTGCTGCTA CTACAACATC AAAGATAATT GTGAATGAGA GGGAGAAGGT 
    ATCTGGAAGT ATAGATTGTG TTGATGCTAC TTCTGAATCT ATTCCTAACT 
    CGAAAGGAGA GAAGCT

AT4G00930.1

Model type
Protein coding
Short Description
COP1-interacting protein 4.1
Curator Summary
Encodes COP1-interacting protein CIP4.1.
Computational Description
COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link
InterPro Scan - TAIR