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53-4408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7753472 [Map]; Strand: w
      • AT5G23100.1 - [+] show detail - Protein of unknown function, DUF617
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-4408-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT GCCCTCAAGT TAAATTCACA CCAACAACTT 
    TGATCATTAC CACATTCTCT CTCTCTTTCT CTCTAGAGCT TCTAGCTTCT 
    CTTTCAATGG CGAAAGACTT TGCCTCCAAG AGACACAATA GTTTCCACTG 
    GACAAGAAAA GTCGGATCAG ACGAAAACGA CGACGTTTCT TCTCATAAAC 
    CTCTTCCTCA TCACAACAAC ACTAAACCTT CTTCTTCTTC ATCTTCCTCT 
    AATGTAATCA CTCACAAAAA AAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7753427 [Map]; Strand: w
      • AT5G23100.1 - [+] show detail - Protein of unknown function, DUF617
        Distance: -7; Region: promoter
    Flanking Genome Sequence: 53-4408-1 - 3-prime edge 
    CTTGAGGGTT TGGTCTATTT GGTGAATATA ACTCTCTTTA TCTCACTTCT 
    TCTCTTTGCT TTTGTCTCTC TCTATCTCTT GTCGTTGTGA GTGTGTTGGT 
    GTGAGAGAGA AGATAATACA ATTTGACAGA GAATCCGACN TGTGATTGGA 
    CCCACCATTT TCATCTTTGT AGAGGATTTC GGAAATCAAA ATTTTAAAGT 
    AAGAAAAAGA AAAGAGAAAA AACAATAGTT TCTGAATATA AGTGTAGATT 
    TGGCTTTTGC TTTTTAGTTC AATATTTAAC CATATTAGGT GTCAAGTGAT 
    TCGGCTTGGG ATTAGTTTTA AGACTTTTTA GCTCAATTGG TTGCTTATTC 
    TAGAGATATT TTTGGTTTTT TAAAACGGAG TATGCTCAAT TCTTGTTAGA 
    CAATTTGAAA ATGTAAAATA ACTGATTCTA TCAAGTAAAG AGGAGAGAAA 
    TATTTTTTCT TTCATTTACA TCTTTATCTC TTTCATTCCT CTCAACACCA 
    CCAATAAAAC CTTTTGCCAA TATGAATTTA ATAAATGTGA GCCAAGGCAA 
    AATATGTATT TAGGAGAAAA TATATAAAAA GTATAAATAT ACAAGAAAAG 
    CT

AT5G23100.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF617
Computational Description
Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT3G25640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR