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Mutant Lines
53-4533-1

53-4533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 28759977 [Map]; Strand: w
- AT1G76630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT1G76630.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAGG CATTACTACT CGCGTGTAAC GCTTGATCTT 
AATCGAGCTG CTAAGTGTTA TCAGAGAGCA GTGTTGATAA ACCCTAATGA 
TTCTGATTCT GGAGAAGCTT TGTGCGATTT ATTTGATAGA CAAGGGAAAG 
AGATTTTGGA AATTGCGGTT TGTCGTGACG CTTCTGAGAA GTCTCCTAAG 
GCTTTCTGGG CATTTTGTAG ATTGGGTTAT ATTCAGGTTT GGTTTCAATT 
GGCCTCATCT GTTGCTGCAA TCTGTCTTTA TTGTCTTGCT TTGGTGATCA 
ATGGCTATGG ATTCTATCAC AGCTTCATCA GAAGAAGTGG TCTGAAGCTG 
TTCAGAGCCT ACAGCATGCA ATTAGAGGTT ATCCTACCAT GTCTGACTTG 
TGGGAAGTAA TTGTCCTTTT TCTCTTCTTC TAGTTATTAA CATTTCCTTA 
CATTGTTTCT TTACTATATG ACCGAATTTG ACAAGAATTA TTTTTGTCTG 
TCTGTCATTN CANGCTCTAN GCCTTGCTTA CCANCNACTN GGAATGTTTA 
CTGCTGCTNT CAANGNAAGA CACTGNNTCC TCTTTTTTGA CCNGNATTNN 
CCCNNNTNCT TNAANNGG

3 prime edge [+] show sequence

Chromosome: 1; Position: 28759929 [Map]; Strand: w
- AT1G76630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT1G76630.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (CDS)

CNCNNACTNC TAGCAACGCC ACTGCAGTTA TNNGGATNNG ATANTCAGCC 
CGANGNCACN NAAATGCTCC GTCGCTTTCT CTGAATCTCC ACCATTATCC 
CACAGATACA AACCCTGCAA TCAAAATCAA AGTTCCAAAA AAAATTCCAT 
TAGCAGAAGA TACCAAGAGA ACCAATAGTA AAGGAACTAA ATTTATGGTC 
GGAAAACAAC TTACGAGTTC GAATTGTAGA GAAGAGTCAT CTGGGTTCTC 
TTCTACAGAC TTCTTAAGCT GCTCTAATTC CATCCTCACC GTCGTCTTCC 
TCAATGTTTT AGAACAAATT TAGTGTGAAA GATCGAAGAT TTGGAAACCA 
GGAAAGAATA ATATTCAATC TGAAGTGAAG ATAATTAAGA AGGGAAAGAT 
TAAACATGTG AATTTCTTCC TTCTTGTTTA CTCTATCTCT TACTCAAACC 
CTAACTTTCC TCTCACCGGA AAACAAATCA TCGGCGTCAA GATACAAAAA 
CCAAATTATT TATTAGGCCC TTGTAGTATT ATCAAAATCA AAATTACGCC 
ATGTGTTTTG ATACATTACT TATTAAACCC TGGATTAGTG GAATGAATAT 
TAGGCCCAGG CCCAAGTATC TTCGCTTTAA GACCCGGTTT GCTCGATCGG 
TTTACTCCCA GTTATTTTCG TTACACGGTT TAAAACCTTA ATTAGTATTT 
AGTAGTTCTC GGGTTATT

AT1G76630.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 7905 Blast hits to 5237 proteins in 907 species: Archae - 493; Bacteria - 3636; Metazoa - 1081; Fungi - 415; Plants - 279; Viruses - 0; Other Eukaryotes - 2001 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76630.2

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1).
Link: InterPro Scan - TAIR