1. Home
  2. Mutant Lines
  3. 54-0375-1

54-0375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4926175 [Map]; Strand: c
      • AT1G14390.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-0375-1 - 5-prime edge 
    GGNGGGNAGG AAGAAANGNG GGGGGGAGNN ANANNGANAA AANTAAANNN 
    NGNCGTTTGG CGCTGAANAA CAAGGCTNTG NGGACCNNAG AACCNCCCCN 
    GNACTTACNC ACCCGTNNCA CCNGCANTTN CAAGATACAA AGGNTNACCG 
    ANCGAAAANA CCAGCCGCGG GAANTCGACN AANCGNGNCA AGTANATACC 
    NNGTGAGGNA ATCCCTCAAA GACCCGNTAG AGATATATTC TCGGACAATG 
    AAAATANNGC TTCCGGCATA NGGAAGATGA TCTTGATAAG NNCCAATGCA 
    GNGNNCAANA ACACTGACCA AATGCANATG CCTNAGCTNN GATAAAACTT 
    CCANTNGTCG AGCTAAANGC TGTGTNGAAN ANNTCTGNGT CAGNNTAANA 
    CACCNNACNG NCACTGCTAT GCCTACNCTA AGACAACCTT TGGGCAACNT 
    GGNGGAAANT TANATNTANC GANGAGTTAG ACACNTCGGG ANNAAATTAC 
    NCAAGNNAAG NNCCCAANNN ACANNNNNCC NNNNACCNTG TGNNCCCANA 
    GAGNNNANCT CCCGGNANNA AAAATNGNCG GGAGCNGTNT NNCCAGNNCC 
    NTCCGAAGAG NAAACTNCCN GNANGGGGGA CANCNCNANA NCAANCNNCA 
    CGNAGCCNTA AGGGNAGCGG GACNCCNACG CNGCGANANG CAACAGANNA 
    NNNCACGTNA GGGNTTGGGG GGGGGGGAAA ACNNCNANTC NNGGNATNCN 
    ACAGGGNCNN NNGCCGCTAC NNNGNANTNN CANCNCGGGG NCNNGNGCAA 
    CCNCNNCCCG GNCCNCACCC TAGACGNTAN TNACAANAGC GCNANNTCNN 
    ANANNGTTAA AAANANCNNN CCGAGANNNN CNGNNATAGC NAAGCANCNC 
    CCAANGCCNN ANNGAANCGG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17886043 [Map]; Strand: w
      • AT3G48300.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 23
        Distance: 0; Region: exon1 (CDS)
      • AT3G48298.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -376; Region: promoter
    Flanking Genome Sequence: 54-0375-1 - 3-prime edge 
    GTTCCAACAC CATATTTCCG TCCCAAAGCT ACTCTACATA TAACATCGTT 
    AGTTAAACTC GACAAGATCT TGCTAAGATT TACCGGTTTA GAACTCGATT 
    TACGGATCGT TTCCATCATC AGAGTGATCT CTTCTTGTCT CACGTCTTGA 
    AAGGACCGTA CCATTTTGTT GCTGAGGAGA TGGAGAACAC TAACACTCTT 
    CATTTGTCGC CAATACTCTC CATAAGGAGC TGAGGCCATA TTACGGCTCT 
    TGTAAAGAAG CTTTTCGAAG ATTTTTGACC GTGGACGGCT AGCAAAAACG 
    CGATCATGCG TCTTTAAAAC GTCTCGAGCT GCTTCTGCTG TNGAAGCTAC 
    AATAACGGGG ACACTTCCGA AGTGGAAGAN CATGAGTGGA CGTAA

AT1G14390.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G02780.1); Has 96517 Blast hits to 51613 proteins in 1566 species: Archae - 24; Bacteria - 6061; Metazoa - 18233; Fungi - 1323; Plants - 64840; Viruses - 89; Other Eukaryotes - 5947 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G48298.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G48300.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily A, polypeptide 23
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily A, polypeptide 23" (CYP71A23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 26 (TAIR:AT3G48270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR