1. Home
  2. Mutant Lines
  3. 54-1395-1

54-1395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26579465 [Map]; Strand: w
      • AT5G66600.1 - [+] show detail - Protein of unknown function, DUF547
        Distance: -639; Region: promoter
      • AT5G66600.3 - [+] show detail - Protein of unknown function, DUF547
        Distance: -840; Region: promoter
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -639; Region: promoter
    Flanking Genome Sequence: 54-1395-1 - 3-prime edge 
    GAACTGTGTT GGATGCATTC GACCATGTCC TTGGTTTCGG GTGGATTTTA 
    TNTAATGTTA TTATAGCGGT GATTTTTGGC TTTTCAGAAA CCGGAGAATA 
    TGTGTTCACG GGTTTATTGC AGACTATGTG TTCGTTGAAA TGTCTCACTG 
    TAGACGGTAG TACCATCTCC TATGTCCTGG CTTCTGCTGC TGCTGTTGAT 
    GCGTCTCTTT ACCATTGGTA ATCTTTTTTA TCTACTCAAC CAAATTTGAC 
    TCGAAAAGAA TTTATGATTC AGTTGAAGTT TTGTATACTT TGAATAGAAC 
    TAAAAGTCTA AAAGTATGAA TAGGATTACA TTAACATTAA GTAAGTAAGA 
    ATGTAGTTTC ATGCCAATGG GGCCATGTGA TTTAAGAACT GTGGAGGAGT 
    TAGAGGGACG GTCAAC

AT5G66600.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66600.3

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66600.4

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
Link
InterPro Scan - TAIR