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Mutant Lines
54-1934-1

54-1934-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 16563420 [Map]; Strand: w
- AT2G39710.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: -40; Region: promoter

ATAATGATGA TGATGATGAC GAATCCATCA TTAGTAGTGT AGACTCTTTG 
TTACATACAT ACTTGACGTC TTTAAATATT GTCTATCTTT TTTTCTCTCT 
ATATTTCTTA ATTACGAATT GCCCGGTTTG TTCCGGTTTA CTTTGAATTT 
TAGGTGACAA AAACTTGAGT TAACGTCTAA GCAATAATTC TAGTAGCAAG 
TCAAGTCATT GACCAAATTA ACCACTTAGG AAACTATAAC TTATACTATT 
CAAAACATAA TTTTGTCTCG ACCTAACAAA TATCATTTCA TGAAGATTAT 
TAGGGGTTTG GTGTTGTCGA ATT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 16563304 [Map]; Strand: w
  - AT2G39710.1 - [+] show detail - Eukaryotic aspartyl protease family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1934-1 - 3-prime edge
```
ATCATTATCT CTTTCAAAAA ATTTTCTTCG AATCTCAGTT CTACTTCTTA 
TTTTCCCTCT AACGTTCTGC AAAACATCTT CTACAAATCA AACACTACTC 
TTCTCTCTCA AAACACAGAA ACTTCCTCAG TCTTCTTCAG ACAAGCT
```

AT2G39710.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Curator Summary: Encodes a Cysteine-rich peptide (CRP) family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link: InterPro Scan - TAIR