1. Home
  2. Mutant Lines
  3. 54-2074-1

54-2074-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16490637 [Map]; Strand: c
      • AT2G39500.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1049; Region: intergenic
      • AT2G39510.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 506; Region: intergenic
    Flanking Genome Sequence: 54-2074-1 - 5-prime edge 
    CNATTCACCA TCCTACTTGA CGTCGGTAAA GTAGAAAGAA AAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16490708 [Map]; Strand: c
      • AT2G39500.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1120; Region: intergenic
      • AT2G39510.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 435; Region: intergenic
    Flanking Genome Sequence: 54-2074-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAA 
    TTGGTGATCC GATAGGATTT TGAAATGACT AACGTAGAAT ATTCGAACAA 
    AACAGCACCA TACACTCAAT GCTCTTTCAG TATGAAGCT

AT2G39500.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39510.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 4772 Blast hits to 4753 proteins in 819 species: Archae - 36; Bacteria - 2386; Metazoa - 4; Fungi - 0; Plants - 1228; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink).
Link
InterPro Scan - TAIR