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Mutant Lines
54-2194-1

54-2194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24109675 [Map]; Strand: c
- AT5G59840.1 - [+] show detail - Ras-related small GTP-binding family protein
  Distance: -424; Region: promoter

CACATATATG TAACCTGCAG AGAATCGGGA AAAAAGTATT TTAACTTTAA 
CTTGATTCAT TGTACAACTT TCAACATTTT CTTCCCCCAT CAACTGATTA 
TAGTTCTAGA AATCATTGTT GCGAATTTGT TGGCAAAGAG TAGCTTATAA 
GCATGTATAT ACTTCAGCCA AGTTGCCATT TATTTTCCAT ATATGCNTTT 
GTGTGACATT TGAGTTTTTG ACTTTCATTT TGTGGAACTA TAACTATCCA 
TACCACGTGT CTATTTCTGG TTAGTCCATA AGATTGATTT ATATTTACGA 
GCGTATCAGA AAAGGCCCAC AAGGACTCAT TAAAGAAGAA AGGCCAATAA 
AAGGCTTCAT TCTTTCTGGG CCATCGGACT ATGATCTTGC TAACTTACGC 
TTCAGGTAAT ATCGTGCACG CGAAGAAGAG GCCAGAAGAG AAGTTAAATC 
AGGACTGGCG TATTTTAGCC GTCCGCCATT TCCATCGCTC TCTCTCGTTT 
CTTCTCTGCT CATTTACTAT AACCAACAAG GTCTCTTCTC TTCTCTTCTC 
CTCTCTGCAT CATTTTGATC CGGTACGCAT TCTTCGCTGA TTCCTTTAGG 
TTCTTCAATT TTCGATCTCT GTTGTCTTCA GATGACACAA AGCAATTTGG 
TTTTTGATCT CTGAGTTTTT GTTTGTTNGT TTTCCTCAT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24109748 [Map]; Strand: c
  - AT5G59840.1 - [+] show detail - Ras-related small GTP-binding family protein
    Distance: -497; Region: promoter
Flanking Genome Sequence: 54-2194-1 - 3-prime edge
```
TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GTATATACAC AGTATGTGAA TGATCAAAAA GAAGATTTAA TATATCTAAG 
CATGCAGACA AAAACCTATT GCTAAAAAGA TTTCTAAGAA CCGGAGACCG 
TTTACCAAAC AAAATATGAA GTTGAATT
```

AT5G59840.1

Model type: Protein coding
Short Description: Ras-related small GTP-binding family protein
Computational Description: Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR