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54-2347-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19286241 [Map]; Strand: c
      • AT5G47540.1 - [+] show detail - Mo25 family protein
        Distance: -543; Region: promoter
    Flanking Genome Sequence: 54-2347-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGAC CATATTGCTC ATTTACATGT GACCTTTGTT 
    TTGTTTATCC AACTACCTTC TTCACATTTT CCATCATCAT CATCTCTATT 
    CATCTACATA GTGTCTAAAT TGTTGAAACC AATACCTATT TCATTTGTAA 
    TCATCGGTTC CGATTACAAA ACAATAACGA TACCAAAATA ATTACGATTA 
    GTAAGAAACA ACAATACAAG AAATGCNTGA AATCACAGCT TTTAGTATCG 
    CTAACTTTTC ATATTTGTGA TCGATAACTA CTAAAACGAT AAAACTAGTA 
    GTAATTGTTA GCAATCATTG TTACCTTTTT AATATCGCTA ACTTTTCATT 
    TTTCATTGTA TTCGCTGTGG CAAAATTGTA TTTATAAATA CATGTAACAT 
    TGTTACCCAA AAAATGTTAG CAATCGATAC CCAAGGATTC TATTTTCGAG 
    TGACCTCGAA CAATTGCTTT TTAGCCATAT TAAAATATAA TCATAACAAA 
    AAGTGACACG AAAACAAAAT ATAAATTAGT TTTAAAATCC GAGGGAAACA 
    AAAGAAAGGA GAAAATAGCT CTCTCTCTCT CTCTCTCTCT NTNTNTNTNT 
    NTNTNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19286250 [Map]; Strand: c
      • AT5G47540.1 - [+] show detail - Mo25 family protein
        Distance: -552; Region: promoter
    Flanking Genome Sequence: 54-2347-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACCAAAGACA AATGACATGT TCACTTTACA CCTTCACTTT CTTTCTTTCC 
    CTCACATGTT CCCTCTTGTC TCCTGTTTTG TAATTGACTC ATTTAATTGT 
    TTTATTTAGA GAGTGTTATT ACATCTCTCA ACTGTCTCGT GACTTGACCC 
    ATAATTTGCA TACCAGATTA TCCGGCATAA TTACCGGATT TGTCAAAGAA 
    CTTGTTCAAT CATCATTTCT TCAGATTTGC ATATTTTGAA AACTATAGAA 
    ATACATAAAA TAGACACAAT AATTGTCTTA TGTTTATTTT AACTCCTTTG 
    TTTTTAATGT TTCTGCAATA TTAATAAAGA GCGGGTTACA TGTTAAAAGC 
    T

AT5G47540.1

Model type
Protein coding
Short Description
Mo25 family protein
Computational Description
Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR