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Mutant Lines
54-3289-1

54-3289-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 734289 [Map]; Strand: w
- AT2G02640.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 18; Region: intergenic
- AT2G02650.1 - [+] show detail - Ribonuclease H-like superfamily protein
  Distance: -1122; Region: intergenic

GCCACAGTGG ATAGGATTGC TTATATTCTA TGTTCTAGTA AACATTTGAA 
GTAAGGGAAA CCCTACAATA CACGTCGACA ACCTTTGAGT TATCCGTTTT 
CTTTTAAAAT TTTAGTTGTA CCTGTAAGTC TGCACTACNT TTTTCTTTAT 
GTATATATTT TTGTGTTGTT GTTGTTGTAT ATATATATAT ATATANACAT 
ATATTTTGTG TGGGGTTCTC NANAACACAN TGNANGTGCG CGTGAGNTGA 
NATATNTANA CNTTNNTATA TANAANNGCN CACNCTTTAT ANNAAAAAAA 
ATANATGNGG TNTANNACAN TAANNNATNN GTGTTATANA AGANATGNNN 
AGANANCNCT NTATGGGANA AANATNNGGC NCTTATTNAG AGAAACNCCG 
ATATATATAG ANANNATGTC NCGANAAANA NACNGGNNNT TNANAAAATG 
AGANACNTTT TANTAGAGAG ANAANANTAT ATNTTTANAA ATGANANACN 
TANNTNGTGA TATCTANCCA GTCTCNCCAT NCAGNGANNG ACATNNCTAC 
ACGNGNGGTN TNGGGTNTNG GGTANNGGGT ANNGGGTAGN GGGTANNGGG 
TANAGGGTAN NGGAGANNTA TNTTCTNTNN CNCCCACACN CTCTNTATNN 
NATATCNCAC ANNCNANNNN TTTTNTCCNC ACANTNNCAC TNAATCNNNC 
TATNNTC

3 prime edge [+] show sequence

Chromosome: 2; Position: 734173 [Map]; Strand: w
- AT2G02640.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

ACTGTGGCTA CCAAAAATAT TGGATACGGA CAACGGATAT TGCACATACA 
GCAAATAGGC CGAGAAGCAG AATTGTTGTG TTGCAAACTA ATATCAACCT 
CACCAATTTT GTAAGTTTGA CCAGTCTTAT AATATTGATC TGGGCCAAGT 
AAGCAATTAA TATGAAGCGT GGTGCAGCAA TCTTTGCAAT TATAGAACCC 
TTCTTTTCCT CCAATTGATA ACTTTCCCTC ACATAATTCA CACCAATCTG 
AGTCACTCAC CTCATCTCCA TGACAAAATG TGAGGTAATG TTCGTCATGC 
TTGTACCTTA CCATGTATGG TAAGGTTGCG CATTCAAAAC ATATAATAAA 
GTCACATTCA ATGCAGTTAA GTACCTTCTT ATCTTTCGTT GACTTGCAAA 
TGTGGCACAT TGGCTTATCT TTTGGGTCTA ACGATAGGAA TAAGGGATGT 
CGATGGCCTT GATAATTGAA CGGCTCAGCA GTCGAGGCAC ACACTGCATC 
TAGTTTAAAG TAACAATTTC GGTTATAACA CGAATATCCG AAACCATTAC 
TCTTACGCAT ACAAGCACTG CATTTGAAGA AAGCGTTTAC ATGATCACCC 
TTTTGTGTAA GGGGATGGGG GGATGTAATG GATGGACCTT TTTACGTGGA 
GCATATGCAC ATGTTTCGTG TAGGATGAAA TCACATTCCA CACAAACATA 
AATATTTCCN TTCGTTGATT TGGAAGGACA CAG

AT2G02640.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02610.1); Has 1575 Blast hits to 615 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 2; Plants - 1557; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02650.1

Model type: Protein coding
Short Description: Ribonuclease H-like superfamily protein
Computational Description: Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT3G09510.1); Has 1375 Blast hits to 1363 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1371; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR