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54-3424-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5561158 [Map]; Strand: w
      • AT5G16910.1 - [+] show detail - cellulose-synthase like D2
        Distance: -521; Region: promoter
    Flanking Genome Sequence: 54-3424-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGC GTTGAATACT TCAGACGGAT TTGTTAACAA 
    CAAAGTCTCT ACTTCTTCTT CTGTTAATTA CTATATAACT CAAAGATCTG 
    AGTTTCTTCT CTCTTCTTAG CAGTTCCTTT CCTCTGAAGG TATTGTAAGC 
    AATCTCGAGT TTCAAATCTT GTTTTATTGT TTTCTTATAA GTTCGTGGTG 
    GGATCGTCTC TTTTTGTCTG AAAATGTCTA AAGCCTGTGC TTAAAGAAAG 
    ATGTGTGGGC TTTTCGAGAT ATTCTCGGAT TTGAAAGTTT GAAACTTTGA 
    ATTAGTGTAT TCGTCTTGAT AACTTTAAAG GTGGTGCCTT TTTGTTGTAG 
    TAAGCAATGA TTGTTACCTT TTCTTTTCAT TTGTGTGAAT GTTGATGATG 
    AGTTTGTTGT TAGATCGATA TATATATATT GATCTGTTTC TTTGTTGATG 
    TTTTTGAATG AATTTAAGAT GTCTTTGTTT CTTCTTTTGC TAATTTTGTC 
    TTTGACTTCT TTCTGCAGGG ATCTGCCAAG TTAGATCCTA ACTATGGCAT 
    CTAATAAGCA TTTTGATAAA AGTCGATCAA ATCTATCAAA CAACTCTGAT 
    ATTCANGAGC CTGGAAGGCC ACCTGCTGGT CACTCTGTCA AATTTGCTCA 
    AAGAACTTCC TCGGGTCGCT ATATCAATTA CTCGAGGGAC GATCTTGATA 
    GCGAGTTGGG CGGTCAAGAT TN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5561155 [Map]; Strand: w
      • AT5G16910.1 - [+] show detail - cellulose-synthase like D2
        Distance: -524; Region: promoter
    Flanking Genome Sequence: 54-3424-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATA 
    CGCGGTCGTG TCGTGCCACC CAACTGGATA TTATTATGAG GCATTTGATA 
    AGAAGAGATA GTGAAAGGAA GAAGAAGAGG AGAAAAGGAC TTAGTCGTGA 
    GCAAATACTT GAGCACTCCT GCTAACTAAT ACACNGTTAG CCGATTTATC 
    CCCAAAATAT ATATTCAAAG ATCTTAAAAT ATATATAAAA CAAAGAAATT 
    GCCAAATTTT GTAGAATCGA GACGACAAAT CAAGAAGGAA GATCTCTACG 
    ATCTATTTCG AAATTTTTAC TAAGGTAGAA AATTTTATGA CGCGGTGAGA 
    CAGCGAAGAC GAAGGTGGAA CGCCGCCGGA AAAAACAAGT TGACGTAGTA 
    CACTTTTTTT CTTTTTTTCT TGAAACGTTT TAATTGATTT GGGGGGGGGG 
    ACTGAGGTTT TTCGGACAAG GTANANAAAA AAGTAANAAC GACTNTTTTT 
    AACTNTTGGG GNCTTATTTA TNTTTTAACN CGTTAAATAT TGNTTCCATT 
    TTTTTTCTNT TTCTTGAATA GGGATACCGA AAATTTACTT ACCNTAGAAG 
    ATTAAAGAAA TCTCTAATTA ATTTGATCTC AGTTCAATGA TTTACAAGTG 
    TTTAAAGCAA ACAGATNCTG TNNAATCCAA GTTTTGAAAA TAACTCAAGN 
    GATTNGAATT TTCTCGGGAA GTCNCANGTT AAAAATNTAN TGGNNTTAAA 
    AAATGGAAGA TTACNAAATC CTTTTNT

AT5G16910.1

Model type
Protein coding
Short Description
cellulose-synthase like D2
Curator Summary
encodes a gene similar to cellulose synthase. Located in golgi membranes.
Computational Description
cellulose-synthase like D2 (CSLD2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process, root hair elongation; LOCATED IN: Golgi apparatus, plasma membrane, integral to Golgi membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR