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54-3466-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 176270 [Map]; Strand: c
      • AT1G01480.1 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: exon2 (CDS)
      • AT1G01480.2 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3466-1 - 5-prime edge 
    TACCTGTCTA AACTTCTTAA GACCATGGTA GTCTTGGAAA TTAGCGATGT 
    CGCTAAACTG ATGAATACCT TCAAGGGTGC AAATAGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 176386 [Map]; Strand: c
      • AT1G01480.1 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: intron2 (CDS)
      • AT1G01480.2 - [+] show detail - 1-amino-cyclopropane-1-carboxylate synthase 2
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-3466-1 - 3-prime edge 
    NACAGGTACT ATAAATCATN CATTATNCAC CATATCTTGT CNTCATGCAT 
    ACGGACATAT TATANAANCA ATTNTTACAT GGANAGTTAA TAACACCTCT 
    AGACCCTCAN TTGATATGAT CTGCGTAAGA AAGACAAATT CAGTCGTGGN 
    TNNTNNNTTT TTNAANNGTC AGANATTTTA TTNCTTNTAA AANGTGNNCN 
    TAATTGCTTN TTTATANATA CTTNGCNTGC GGTACNTNTT NNANNTNTGG 
    ACGATNNGGG NNTATCCCCC NATTCTGGGA GAGANAGGTG NNGGANNNAG 
    CTANTGNTCA CTAGGGGGGG GGGGTTCTAT ATNGNGCNAC CCCANNGCCT 
    ATGAGANNTC ACCTCTNNAA AGAATCTGGG CANAANAANA GGNGGNNTGG 
    ACCNCNNGGG CTACAGATCC NGGGCCGGCA ACCNAGCNNC CCTTATNCGN 
    NCGGNGAAAG ATTGAGGATN GGATCTGAGA TNTTCTAAGG CGCTTTGAGT 
    AAAAGCANAN GCAATGTGTT GTTATATCTC ACTTGNGTCT GGNNNGACTC 
    CNATNGGGGA ANCTGNTNAA NAGNGNNTNA CTCTNACTNN GNGGCGCGGG 
    GNTTACCCNN NNTATATCNG NNNGNANTCN GAGGAANGNN NGNCNNTNCA 
    TNGNATCATT GNNCTNNGGN NAGNNANNNN CNNTNCCTAA NNNNGANNGN 
    NNNNNNNNGG N

AT1G01480.1

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 30194 Blast hits to 30192 proteins in 2936 species: Archae - 881; Bacteria - 20730; Metazoa - 650; Fungi - 807; Plants - 1338; Viruses - 0; Other Eukaryotes - 5788 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01480.2

Model type
Protein coding
Short Description
1-amino-cyclopropane-1-carboxylate synthase 2
Curator Summary
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational Description
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 28365 Blast hits to 28364 proteins in 2923 species: Archae - 821; Bacteria - 19365; Metazoa - 634; Fungi - 793; Plants - 1286; Viruses - 0; Other Eukaryotes - 5466 (source: NCBI BLink).
Link
InterPro Scan - TAIR