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54-3478-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 498096 [Map]; Strand: c
      • AT2G02061.1 - [+] show detail - Nucleotide-diphospho-sugar transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3478-1 - 5-prime edge 
    GCTCGGAGTA CATTGCCGGA GCACGGTGGG ATTACGACGG AAGTTACGGC 
    GGCGGCGGCG GAGGAAGAAT GATTCTCGTC GGAGTAAGAA TCGTTGAGTA 
    TCGCCGTCTT GGAATTGGAG CCAAAACGGT TCGATAGATT CATCTTCGCC 
    GACGTTGACG ACGTTGGTCA TCGTCTGGGC GGTTATAAGG TAGTTTCAAG 
    TTTTTTGAAT GTAAAACGCG GCGTTTAATG AGTTTACCCT CCAACGATGA 
    AACGCAGCGT TTAATGGGTT TTATCTGCGA GATTATTTTT TCTACCGTAG 
    GATTGCCGAC CAAAATAACA ATGAACATTC TAAACCGTAG GATCTTGATA 
    TAGAAACGCT GCGTTTAGGG GTTATCCTTC AAAGATCAAA ACACTGCGTT 
    TGGCTCTGTT TGTTAATTTT CCGTTCAAAG GCGATCAAAA CGCTGCGTTG 
    ATAATTTATC TAAACTTCAT TTTCTAGGTT TCTCTACTAA CATTCAATAT 
    CCTAGTTTCA AAAACACATC CGAATAGTTT CTCTGAACCT AAATCTTGCA 
    TAACTTATTT AGCTACCGAG GAGAGAAATT GACAGATTAA GATCAATCTT 
    TGAAGAACCA AAGCAATCTT TGGATACNAA TGGTGCTGAA CAAGTCGAGA 
    CTGCTGCTTC ACTCGTTTCG CTCACCACCG ATGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 498212 [Map]; Strand: c
      • AT2G02061.1 - [+] show detail - Nucleotide-diphospho-sugar transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3478-1 - 3-prime edge 
    CTCCGAGCCG TTCTCTTGCT CTTCTTCATC TGCTTCTGCT TCTCCCTCTA 
    CAGAACTTCT GGTTATCTCC GAATCGTCTC TGACTCTTCC TCCACCCTCT 
    CTCGCATTTT CCCCTCTGTC AACGATTCTT CTTCGTCTCC GTCTCCATCT 
    CCGTCTCTGT CTCCGGTGAG TATTCTTCTT CTTCCACATT GTTTCTATAT 
    ATTTGGTGTT TATTCATAAA TCCGATCTTC GACTTCATTA GACTTCGATT 
    CTAGGGATTT GATTTGGTAA TCGAAATTGA AATTGGTTCG ATTTTGATTC 
    TGATTCTGGT TTTGGTTTCT TAGGAGGAAA TTGAGGAACC TAAGCTAGAA 
    GAAGTATTGC GTAGAGCAGC AACTAAAGAT GGTACAGTGA TTTTGACAAC 
    TTTGAATGAA GCT

AT2G02061.1

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferase family protein
Computational Description
Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G14590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR