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54-3870-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11389050 [Map]; Strand: c
      • AT2G26730.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3870-1 - 5-prime edge 
    CTTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA AGACGAATCA AGTTGTTTAA CTGAGTAAAA 
    CTCGTCGGAA ACTCGCCGGA GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11389048 [Map]; Strand: c
      • AT2G26730.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3870-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGTCTTGAT ATCTCATCTA ACAACTTCAC TGGTTCGATA CCTTTCTCAG 
    TCAATAATCT CACTCACTTG ACTGGTTTGT TTCTCGGTAA CAATGGTTTC 
    TCAGGGAATC TTCCTAGTAT TAGTCTCGGT TTAGTCGATT TCAATGTCTC 
    TAACAACAAT CTAAACGGTT CGATTCCGTC TTCATTATCA AGATTCTCAG 
    CTGAATCGTT TACTGGAAAT GTAGATCTCT GTGGTGGTCC GTTAAAGCCT 
    TGTAAATCGT TTTTTGTGTC TCCCTCGCCG TCTCCGTCGT TGATTAATCC 
    TTCTAATCGT TTATCCCAGC AAGAAATCAA AGCT

AT2G26730.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 147963 Blast hits to 108487 proteins in 3857 species: Archae - 104; Bacteria - 12149; Metazoa - 40706; Fungi - 7620; Plants - 70847; Viruses - 383; Other Eukaryotes - 16154 (source: NCBI BLink).
Link
InterPro Scan - TAIR