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54-4010-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 343971 [Map]; Strand: w
      • AT3G02020.1 - [+] show detail - aspartate kinase 3
        Distance: -136; Region: promoter
      • AT3G02030.1 - [+] show detail - transferases, transferring acyl groups other than amino-acyl groups;acyltrans...
        Distance: -937; Region: promoter
    Flanking Genome Sequence: 54-4010-1 - 5-prime edge 
    NCCCTTANGA GGTTGAGGGG GTGNTANCNA ATGGTANANC NNATAATCTT 
    NGCCANCANA CTCCTCGTAT ACTACATATT TGAGTTNNAT TAAAATTNAG 
    CATATAATNT NCAAACTAGC ACTAATCCTG TGGCTATCAT GGATGTGATG 
    CGNACAATAN GCCTNNACAT TCTACGTTAT TCTNNATTAT AGCAAANTGA 
    CATTCNNATA AAAGGTAATA ACCNNTCACA TATCCCCAAA TACGTCAACC 
    TTTANCATGG GCTGNNCANT GNNANGGATG ANCATCGGNC NAACNNTCCC 
    NGNGGNGANT CNAGACGCAC CNNTNGACCG TATCCATATC CNATTNCANN 
    NTNNGATNAT NGCNTGAATT NANTANNNAA GGGGNTAATG ATTCCTGGCA 
    ANATGGNTNT NNGNAATNTT TAANCNNNGC GGGCACTACA TGGAGGCGAC 
    TCGGTTTGAG TGAATTGANA GACANNGGCT TTNNTGGGTN ATTCGAAAAG 
    CGCCCATGGG CCTTANTGTC ATNTGCGGCC CTTTATGGAG AATAGTCAAG 
    AGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6627873 [Map]; Strand: c
      • AT5G19620.1 - [+] show detail - outer envelope protein of 80 kDa
        Distance: 27; Region: intergenic
      • AT5G19630.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 102; Region: intergenic
    Flanking Genome Sequence: 54-4010-1 - 3-prime edge 
    ATTTTACCAA ACTCCCAGTT AAAATTATTA ATAGAACCAA GATTAGGATT 
    TTTATTCTTC ATCCTAGTAT GAACCTGATT TGTCTCCTTA GGATGTCACA 
    TGATCGTGAG CAAACTCTTC TCGATGCAAT TGCAAAGCT

AT3G02020.1

Model type
Protein coding
Short Description
aspartate kinase 3
Curator Summary
encodes a monofunctional aspartate kinase
Computational Description
aspartate kinase 3 (AK3); CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: Aspartate kinase family protein (TAIR:AT5G14060.2); Has 11044 Blast hits to 11020 proteins in 2545 species: Archae - 256; Bacteria - 7570; Metazoa - 4; Fungi - 149; Plants - 183; Viruses - 0; Other Eukaryotes - 2882 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G02030.1

Model type
Protein coding
Short Description
transferases, transferring acyl groups other than amino-acyl groups;acyltransferases
Computational Description
transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19620.1

Model type
Protein coding
Short Description
outer envelope protein of 80 kDa
Curator Summary
AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality.
Computational Description
outer envelope protein of 80 kDa (OEP80); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19630.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; Has 1062 Blast hits to 1062 proteins in 417 species: Archae - 16; Bacteria - 763; Metazoa - 1; Fungi - 28; Plants - 66; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink).
Link
InterPro Scan - TAIR