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54-4147-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22831051 [Map]; Strand: w
      • AT1G61810.3 - [+] show detail - beta-glucosidase 45
        Distance: 0; Region: intron5 (CDS)
      • AT1G61810.1 - [+] show detail - beta-glucosidase 45
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-4147-1 - 5-prime edge
    CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCTCATA AAGTTAATGA AAATACATAA TTGTATCAAC
    TAATCACTAT CCAGGGATTA AGCCATTTGT GACCGTTGAA CCATGTCGAC
    TATCCTCAAG AACTCGAGGA CCGGTTTGAA AGTTGGTTAA ACCCCGAGAT
    GCAGTGAGTG GTTAAATAAA ATTAGTATTT ATTAACCCCT AATTACTTAG
    AATGGCAATG AACTTATGCA CTTTTTATTT TTTTGTTATT TTTGATAGGA
    AGGAATTTGG TTATTTAGCC GATATATGTT TCAAGCATTT TGGAAACCGA
    GTTAAATACT GGACCACGCT TAACGAACCA AATCAACAAT TAATCTTAGG
    CTATCTAACA GGTAAATTTC CACCCTCTCG TTGCTCCTCA CCATACGGGA
    ACTGTAGCCA GGGGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22830998 [Map]; Strand: w
      • AT1G61810.3 - [+] show detail - beta-glucosidase 45
        Distance: 0; Region: intron5 (CDS)
      • AT1G61810.1 - [+] show detail - beta-glucosidase 45
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-4147-1 - 3-prime edge
    GAATACAATA TGTCAATATT AAAAAAAAAC TTTAATCTAT TATAAACCGG 
    AANGATAAAA AAGTACCTCT ACTAATGAGA GCATCAGATC AATATGTTGT
    AATACTTTAT CCCCAAATAA TTAATCTCTC CAAATCTTCC TCCTGTCTCA
    CAAATAATAA GCTAAATCTA AATAACTCTT CGTCGATTGA GTTTCCATAT
    TTTAATTTAT CAACTCTGGT TAGTCTATGA GATACAATCG AATTTTTTAT
    TTATCATGGA ACGCAATGTA GTATTAATAA TACTGCTGAT TTAAGTAAAG
    AAGGACTTAC TAGGTAAGAT TCTACACCAA GAAATTGAAA ACCTATAACT
    GTTCACTCCA AGGAAAGTCA TTAATTGGAT GTCCTCCTAA GCATAGAANA
    TAATATAAAA TAAATAACAA CATCAAATAA TATGAGAATA TAATATGATA
    AAAGANGTTG ACAAGAACAA AAATAGAANG AAATAATTAT CATAAGAAAA
    TANCCAAAAA TCGATTATAT TGGTCCACAG CTCTATCTGC ATTGTTCTTG
    TCAAGTATTT TCCCTGCAGT TCCAATATAT ATACTTGTCA ATAGAATAAG
    TGAATTAACA AAAATTAAAA ATCTTAAACT AATATTAAAC TATTTCAAAT
    AGAAAATAAA CCAAATGGAA ACCAAAATAA AATACATACC AGGATTTTTA
    TGCGTAAATA CATCCCAATG GTCAACTT

AT1G61810.1

Model type
Protein coding
Short Description
beta-glucosidase 45
Computational Description
beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1); Has 11388 Blast hits to 11070 proteins in 1474 species: Archae - 142; Bacteria - 7900; Metazoa - 698; Fungi - 199; Plants - 1443; Viruses - 0; Other Eukaryotes - 1006 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61810.3

Model type
Protein coding
Short Description
beta-glucosidase 45
Computational Description
beta-glucosidase 45 (BGLU45); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 46 (TAIR:AT1G61820.1).
Link
InterPro Scan - TAIR