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54-4504-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23236641 [Map]; Strand: w
      • AT5G57350.1 - [+] show detail - H(+)-ATPase 3
        Distance: -69; Region: promoter
      • AT5G57350.2 - [+] show detail - H(+)-ATPase 3
        Distance: -69; Region: promoter
    Flanking Genome Sequence: 54-4504-1 - 5-prime edge 
    GGTGGACTAC GTTAGGCTAT TTGGTGGCTC TCTATTTATA TGCCTCTCGT 
    AACTATGCGA CGTCGGTTTA GGTCACCCCA TTTTTTTTAT TCCCAGTCCA 
    AGTCGAAAAT ATTTTATTCT GGAAAAATTA TCATCTCTTT TTTTTTTTTT 
    TNGGAAAANN NAAANNNNNC CCNTNNGNNG GGGGNNAAAA NNNAAANNNN 
    NCCCTTNGCC NNGNNNNGGN NNNAAAANNN AANTNTTNGN AANTNNAAAN 
    TNGGCCCNNN NNNNGNAAAN NCCCNGGGNG GNNANNNTTN GNNAAAAAAN 
    GNCCNAAAAA AANNNNNNNC NAAANNNAAA AANGGGNTTT TTNNNNNGGG 
    GGNAAAAAAA ATTTTTTNNA ANNAAAAAAA AAANNTTTNN TTTNCCCNTN 
    NNAAAANCCN CCCCCCCCCN CAAANNNNNN AATTNCCCNA AAAANNGGNA 
    TTTNNNAAAA AAAAAAAAAA AAAANTNCCN TAAAANNTTT NNTTTTTTNA 
    ANTTTTTTNN AAANTTTTTN NNAAANCCCA ANTTTAAANN NAAAAAAANT 
    TTTNNNATCC CTTTTNGAAA ATTNCAAAAT TNAAGNNCTT TNNAANTTTT 
    TTTTAAANCC CCNGGAAATT NAAAAAAATT TTTTTTTNNN TAGAANCCCT 
    TTTTCNCCCC AAGAATTTGG GGGAAAAAAA AAAAAAATTT TTNAAACCGN 
    CGGNAAAANG GGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23236569 [Map]; Strand: w
      • AT5G57350.1 - [+] show detail - H(+)-ATPase 3
        Distance: 0; Region: exon1 (5UTR)
      • AT5G57350.2 - [+] show detail - H(+)-ATPase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4504-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    CCTTCACTTG CTCTCTTTTT TCCGAAGAAT CTGGTTCGTT TCTCTTTGAA 
    TTATCTCTTT CTCTGTTCTT CTTCTTTTTC TAAAGTCTCG AATATATCTT 
    CATTATCATT ACTTTATTTG CTTCGTTCTT CCGCAGTTTT GTGCAAAGTT 
    TTAACGATTT TTTGGTTTTG AACGAAGGCA CAGAGAGAAG ATGGCGAGTG 
    GCCTCGAGGA TATCGTGAAC GAGAATGTTG ATTTGGTATG GATTTCTTCT 
    TTTTACTCTG TATATATTTT TTTGTTTCGT TTGTTTAACT TGTTTAATGA 
    ATATACGAGA GGAAAGTTTA GTTTGGTTTT GTTTTTTACT TAACGATTCG 
    ATCAAATTAG GGTTGTACAC AAATCTCGTT ACATCATCGT TGAACTATTG 
    ACTTCATGTT TTAGCATGAG ATTTTTATTG TTTGATTTCG ATGAGAAAAG 
    AATCCATGAA AAAGTGTTAA TATTATCATA ATTATTTCAG TTTTTCTGCT 
    TTTTTTTCAA AATTACTTTT TCTTTATTTA TTTTTTTATT AGATTTTGCA 
    ACTGCACTAA TTTAAAACAA TTTGCAGTCA CCAGAAATTT AGTTACAATT 
    ATGTAAAAGT TGTTTCCAAA TAAAGCAAAA GTAATTACAT TAGTAGTACT 
    CTCTACTTTC ACATGATCTA TCTTAATGAG TATACTTTGA GATTTCTTAA 
    ANAAGTTTTA GTCAATTCTG TTTTCAATAC TACGT

AT5G57350.1

Model type
Protein coding
Short Description
H(+)-ATPase 3
Curator Summary
member of Plasma membrane H+-ATPase family
Computational Description
H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 36687 Blast hits to 32635 proteins in 3162 species: Archae - 691; Bacteria - 23215; Metazoa - 3969; Fungi - 2549; Plants - 1910; Viruses - 3; Other Eukaryotes - 4350 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57350.2

Model type
Protein coding
Short Description
H(+)-ATPase 3
Curator Summary
member of Plasma membrane H+-ATPase family
Computational Description
H(+)-ATPase 3 (HA3); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1).
Link
InterPro Scan - TAIR