F02041

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F02041

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F02041

Determination of introduced cDNA(s)

  • RAFL06-72-N04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-72-N04 - Resource: pda03405

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-72-N04 - full reading 
    AAAAACCCTA AACTCAAAAT CCGTCTCGGT GGAGGAAAAA TGGCTGAAGA 
    AGCTCAAGTA GATCGTTCTA ATGGCTCTGA TTCATCATCT CCTCCCATAA 
    AGTTACCTCC TTTCATCACC AACCTATTCG CCTTTCTTCA ACCTAAGCCT 
    CCTCCTGCTA CTATTGATGC CAATGCTCCT AAACCTACCG GCGAGAAGGA 
    ACCTCTGAAA TCGACCTACG AGACTGTCAC TTTCCCTTAC AATCCACCCA 
    AAAGCGCAGA GCCAATCAAG TTTGAGGCTG AGCCCAGCTC TGGCAGGACT 
    TCCAACTCTG TCATCCTTTG GCAGGTATAT GCACTTGGAG GGTTTCTTGT 
    CCTGAAGTGG GCCTGGGCAA GATGGAATGA AAGGAACGAG AGAAGTGACA 
    AAAAGGAGGC GACGGGTGAT GATGATCAGA AAGATGATGA TGAGGATGAT 
    CAATCATCTG ATGGGCATGA AGACTAGTCA TATTACTTGA ACACGATGAA 
    AATGTTACCC ACTTTGGTTC TGTATAGCAA AAACACCATA AACTTCAAAA 
    TGAAGATTTC TTATTTTCCA TTGTATGTAC TTGAATCTTG AGTCTCATCT 
    CCTTATCTAA GGGGACTCGA AATCTCTTCT CATGCTGGCA AGAAGTTTTT 
    TTTTTCTTAC TGGACAAAAA AAAG

    Gene models with high sequence identity

    1. AT3G52230.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G52230.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR