F04350

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F04350

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F04350

Determination of introduced cDNA(s)

  • RAFL09-79-M19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-79-M19 - Resource: pda17847

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-79-M19 - full reading 
    GACGGCTTTG CCTCCACCGC ATAAAGCTCC CTTCACAGAT ACATACACTC 
    TCTTTCTCTC TCTTCCGGCG TTTATTCTTC TTATTTCGCC ACCGTCCTCC 
    GCCGCCGTGG TGGACTTATA TCTCTGCGTT TCACGACCTG CCGCCACCGC 
    CGGCGATAGG TTTCAATGAT GAATTAAGGC GTTGGCCAGA GAGAGAAGAG 
    AGATTGAGAT CTGTCGATAT GCTAGCGAAG AATCGGCTGC CGGGAAGCGG 
    CCACACTACT CCGTCTCCTC CGGCATCTCC TCGCCGTTCT CCTCGTTATC 
    GTCACGGTCG GTCTAAAGCC GCCGCCGGTA GTAGATTTCC TACGGTTCAA 
    CCAAGTCGGA CCCTCGCTCA TCGCCTCTCG TGGATCCTCT TATCGGTTCT 
    TCTCCGTCGT CAGGGGATTT TCTTATTCGC TCCTCTAATC TATATCTCTT 
    GTATGCTGCT TTACATGGGA ACCGTCTCCT TCGACGTTGT TCCAATCATT 
    CAGCGTCGAC CTCCTCCAGG ATCCGTTTAC AAAAGCCCTC AGGTTTACGC 
    CAAGCTCCGT CCTGAGATGG ACGCCGATAA TTCCACCGCT GATGCCATAA 
    CAACCATCTG GAAACATTCC TATAAAGGTG GTGAATGGAA GCCGTACGTG 
    AACAAGTCTA CTGGAGACTT GCCTGAGTCA AACGGTTACA TATATGTTGA 
    GGCAAATGGA GGCTTGAATC AGCAGCGGAC ATCGATATGC AATGCGGTTG 
    CTGTGGCAGG ATATCTTAAT GCAACTCTAG TAATTCCCAA CTTTCACTAT 
    CACAGCATAT GGAGAGATCC AAGTAAATTT GGGGACATCT ACGATGAAGA 
    GTTCTTTGTC AGTACCTTAT CAAATGATGT GCGGGTGGTT GATACAATTC 
    CTGAATATCT AATGGAGCGT TTTGACCATA ACATGACAAA TGTCTATAAC 
    TTCAGAGTTA AAGCATGGTC ACCTATTCAA TATTATCGAG ACTCGATCTT 
    GCCGAAACTT CTTGAGGAGA AGATTATACG AATATCTCCA TTTGCAAATA 
    GACTTTCTTT TGATGCTCCT CAAGCTGTCC AGAGACTTAG ATGTTTGGCG 
    AATTACGAAG CCCTGAAGTT TTCGAAAACC ATACTAACCC TAGGAGAAAC 
    ACTGGTGAAG AGAATGAAAG AGCAAAGTGC AAACCACGGT GCAAAATACG 
    TGTCTGTACA TCTGCGTTTT GAAGAGGACA TGGTAGCTTT CTCCTGTTGC 
    ATATTTGATG GTGGGAACCA AGAAAAACAA GATATGATTG CAGCAAGAGA 
    ACGAGGATGG AAAGGAAAGT TCACAAAACC AGGCCGTGTT ATACGACCTG 
    GTGCTATCAG GCAAAACGGA AAATGCCCTT TAACTCCTTT AGAGGTGGGT 
    TTAATGCTTA GAGGAATGGG GTTCAACAAA AGCACATATA TTTTCCTCGC 
    GTCTGGTGAA ATATATGATG CGAATCGAAC TATGGCCCCG CTACTAGAGA 
    TGTTCCCAAA TTTACAAACT AAGGAGATGC TTGCATCAGA GGAGGAACTT 
    GCTCCATATA AGAATTTCTC TTCCAGAATG GCTGCAATAG ATTACACGGT 
    CTGTCTCCAC AGTGAGGTAT TTGTGACCAC GCAAGGTGGA AACTTTCCTC 
    ATTTCCTCAT GGGTCATCGG AGATATATGT TTGGAGGACA TTCCAAGACC 
    ATTAGACCAG ACAAGCGAAA GTTAGCAATC CTCTTTGACA ATCCAAACAT 
    CGGATGGCGG AGTTTTAAAC GTCAGATGCT AAACATGAGG TCTCATAGTG 
    ACTCAAAGGG GTTTGAGCTA AAACGACCTA ATGACTCCAT TTACACATTC 
    CCTTGCCCTG ACTGCATGTC CCGTAGGAAC AAAACAACAA CCCCAGAATC 
    GAGACCACCT CCTGCCACCT GAAAACACAC ATTTGATTAC CGGCCTTCCA 
    GAATCTGCTT CTACAGGCTA CGTTCATTCC TTGTAATTCT AATTCTTTCA 
    AATCAGACAC AGGACCTTAG TGACTCGGCC TGCCCAGAAT TTTAGGGAAG 
    ACAGCGTTTG AATGGGCCGT GGAATCATCT ATTTATTCTC CGGCGAGGAG 
    TAACAGCCAC AACATTGTTT GATACCTTTG ACACATTGAA GCTGATGTAT 
    CTAACAGGAA AGACGAGATT GAAGTTTTAA CACATTCCCT AGCTGCTGCT 
    GGGCAAAGAA TAGGACAGCG TTTGGATTTT GGTGTTTTTT TCTTGGGGTG 
    TTTTGGTGGT TTGAAGAAGC GTTTGCGTTT TGTACATTTT GTGAACGCAG 
    GCTTTGTGTT AGGAGATATG TAGAGAGAGA CGGACAAGGG GGAGAAAAGA 
    AGCTGCCCTA AAAGTTTTGT ACATTGATTT GGTTAGAGAT CATTGTCTCT 
    TCTTTTCTTT TCCAAAAAAA AAA

    Gene models with high sequence identity

    1. AT2G01480.1 [+] show detail - O-fucosyltransferase family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G01480.1

    Model type
    Protein coding
    Short Description
    O-fucosyltransferase family protein
    Computational Description
    O-fucosyltransferase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14970.1); Has 836 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 836; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR