F09742

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F09742

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F09742

Determination of introduced cDNA(s)

RAFL09-69-K17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-69-K17 - Resource: pda06667

full reading [+] show sequence

GGTGAAAGGC GAGGAGATAT AGGGGAGAGA GAATCCCATT CCCATATTCA 
GAGCACAAAC AAAAAAGCTT CAATTTTTGG GGACAAAGTT TTTATCTTTT 
CGTTGTTTGG AATTTGGGGG AGGAAGAAGG AAAGGTGTAA GGATAGGGTC 
GTGCGTGTCA ACGAGAGGTG CTGCTGGACG TGAAGCCTCC TCCTCCGCAT 
CGGCGAGGAG GCTTCCGTCG CAGCACCACC TCAGCGGTAG CCTTAGCTCT 
TCTGGCTACG GCGGAGAACC GTCGGATCAA TCTGATATCG GCGGTGCGAA 
GATGAAAGGG CTTTTCAAGT CTAAGCCACG CACTCCTGCT GACCTTGTTC 
GACAAACCCG CGATCTCCTT CTCTTCTCCG ATCGATCTAC CTCTTTGCCT 
GACCTCCGAG ATTCCAAACG CGACGAAAAG ATGGCGGAAT TAAGCCGGAA 
TATCCGTGAC ATGAAGTCGA TTCTCTACGG GAACAGCGAA GCAGAGCCTG 
TGGCAGAAGC TTGTGCACAG TTGACTCAAG AATTCTTTAA AGAGGATACT 
CTACGTCTCT TGATTACTTG TCTCCCTAAA CTTAACTTGG AGACGAGGAA 
AGATGCTACA CAAGTTGTTG CAAATCTACA GAGGCAACAG GTTAATTCAC 
GGTTGATTGC TTCTGATTAT TTAGAAGCCA ACATTGATCT CATGGATGTT 
TTGATTGAAG GCTTCGAGAA CACAGACATG GCTTTACACT ATGGTGCTAT 
GTTTAGGGAG TGTATCCGTC ATCAGATTGT GGCTAAATAT GTTTTGGAGT 
CTGACCATGT GAAGAAATTC TTTGATTACA TACAGCTTCC AAATTTCGAC 
ATTGCTGCCG ATGCTGCTGC TACTTTTAAG GAACTGCTGA CAAGGCATAA 
GTCTACTGTT GCCGAGTTTC TCACCAAGAA TGAAGACTGG TTTTTCGCAG 
ACTACAACTC AAAGCTTCTT GAATCAAGTA ATTATATAAC CAGACGGCAA 
GCTATTAAGT TGTTGGGTGA TATATTATTG GATCGATCAA ATTCAGCTGT 
GATGACGAAA TATGTGAGCT CGAGGGATAA CTTGAGGATT CTCATGAATC 
TTCTAAGAGA GTCAAGCAAG AGTATCCAAA TAGAAGCATT CCATGTCTTT 
AAGCTGTTTG CAGCGAACCA AAACAAGCCT GCGGATATAG TCAACATTCT 
GGTGGCCAAC AGAAGCAAGC TTCTGAGATT GTTGGCTGAT TTGAAACCAG 
ACAAAGAGGA TGAGAGGTTT GAAGCAGACA AAAGTCAGGT TTTGAGAGAA 
ATCGCAGCCC TTGAACCTCG AGATCTTGCT TGAACCAACT AATGCAATTC 
ATCCTTCCTT CCCTTTTAAA ACACTCGAAA AGACATTTTT GAAGCATCTT 
GTTGTTTTTT TACATTAGGT AACCAATCTT CCTCTCACTT TCTCACCACA 
CACACACACA CACACACACA CACACACACA CATACACATA CGAGATATCT 
ATTCGATATA TGTATTCATA TGTACACTAC TTCACTGTCG ATGAAATAAA 
ATGGTTTGTC AAAAGCTCAG

Gene models with high sequence identity

AT5G47540.1 [+] show detail - Mo25 family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Mo25-like	1.3e-119
HMMPanther	MO25	4e-129
HMMPanther	MO25-RELATED	4e-129
superfamily	Armadillo-type fold	6.5e-109

See the detailed result >

AT5G47540.1

Model type: Protein coding
Short Description: Mo25 family protein
Computational Description: Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT4G17270.1); Has 570 Blast hits to 568 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 142; Plants - 154; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link: InterPro Scan - TAIR