F10643

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10643

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F10643

Determination of introduced cDNA(s)

  • RAFL06-80-E10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-80-E10 - Resource: pda03778

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-80-E10 - full reading 
    AAAAAAAAAA AAAAAAAAGG TTCGTTTAAA GAGCTCTGGT TGGGTTTAAC 
    TTGGAGGAAT TAATCGAGTT TGGTGATCTT CTTCTTAGGT TTTTTTTCTC 
    GATCTGGTTG ATTTGCTTAA ACATCTGTAA CTATGGCGGC AGAACCCAAG 
    GCAGCTGTCG AAGTGGTGAA GGTGGATCTA TTCGAGGACG ACGATGAGTT 
    CGAGGAATTT GAAATCAACG AAGATTGGTT GGAGAAAGAG GAAGTGAAGG 
    AAGTTAGCCT GCAGTGGGAA GATGACTGGG ATGATGATGA TGTCAGTGAC 
    GACTTCTCGC GTCAGTTAAA GAAGGAGCTT GAGAATGCTA GTGAGAAGAA 
    ATGAGGTCCA AGATTGCGAG AAAGGCAGGT CTTCTCATTT AGGGAACCTT 
    GGCTTTTTTG TTTGAATTGC ATCCTTTGGT TTATCGTAGC ATGTATCGGT 
    TCTCCTTTTC CTTTACACAT TATACTCTTC CTTGGATGCA AATTTCTCGT 
    CTTTGAAGAT GATAAATTTG AGCTGATAGT AATTCTATTC TGATAATCAC 
    CATCTTCTCT CAAAAAAATA AAAAAAAAAA AAAAA

    Gene models with high sequence identity

    1. AT5G45010.1 [+] show detail - DSS1 homolog on chromosome V
      E-value: 0; Score: 99.82

     

    InterPro Scan Digest

    See the detailed result >

    AT5G45010.1

    Model type
    Protein coding
    Short Description
    DSS1 homolog on chromosome V
    Computational Description
    DSS1 homolog on chromosome V (DSS1(V)); CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834); BEST Arabidopsis thaliana protein match is: deletion of SUV3 suppressor 1(I) (TAIR:AT1G64750.2); Has 302 Blast hits to 302 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 75; Plants - 68; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR