F11941

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11941

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11941

Determination of introduced cDNA(s)

  • RAFL06-09-G16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-09-G16 - Resource: pda02940

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-09-G16 - full reading 
    AGAAAAATGG CGATGGCTTT GTCCAACCCG ACCACAAGCA CTAACCTCTA 
    CCACTACTCA ATTCTCTCGC CGTTCTCACC GCCGTATCAC CTTCACCGTC 
    GAAACACCGT CCTACTAGCG AGTCCCCGCC GTTTACGCCG CCTCGCCGTC 
    GCTGGTGGTC CTCCTTCTCC TCCAGGCCCT GATCCGCCTC CGCCTGAGGA 
    CACCACTCAG CTAGAAGGTC TTGTGGGAGC TGTGACAAGG GTTCAAGACC 
    GCGTAAAGAT TTTCCTCGCA GTGTTCTTTT GGATGTTTCT CTTCTTCTGG 
    GTTACAGTCA CAGATGGGAC GGGTAAAGGC AAAGGCAAGA AGGGTTCACG 
    TTTCAAGTAG TTTCCATATA TGAAGAGGCT TTGGTGATTA TCTACTACTC 
    TATACTGTAT ATATATCAAG ACTTCAAAGA GATCAAATTA CCTGTATAAA 
    CTTCACCAAG TAAGCATCTT CCTTGTACAT CACTTATTCA GATGATAATA 
    GGAAACAATA AGATCGTGT

    Gene models with high sequence identity

    1. AT3G15780.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G15780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR